RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
TUBD1-215ENST00000593110 MTMR2Q13614 643 aa12.5□□□□□ -0.41
TUBD1-215ENST00000593110 SF3B3Q15393 1217 aaKnown RBP12.5□□□□□ -0.41
TUBD1-215ENST00000593110 RETREG3Q86VR2 466 aa12.5□□□□□ -0.41
TUBD1-215ENST00000593110 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
TUBD1-215ENST00000593110 LIMD1Q9UGP4 676 aa12.5□□□□□ -0.41
TUBD1-215ENST00000593110 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
TUBD1-215ENST00000593110 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
TUBD1-215ENST00000593110 UBE2Q2LH0YL09 131 aa12.49□□□□□ -0.41
TUBD1-215ENST00000593110 FKTNO75072 461 aa12.49□□□□□ -0.41
TUBD1-215ENST00000593110 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
TUBD1-215ENST00000593110 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-215ENST00000593110 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
TUBD1-215ENST00000593110 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
TUBD1-215ENST00000593110 SKIV2LQ15477 1246 aaKnown RBP12.48□□□□□ -0.41
TUBD1-215ENST00000593110 COPS6Q7L5N1 327 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 EYA3Q99504 573 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
TUBD1-215ENST00000593110 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
TUBD1-215ENST00000593110 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
TUBD1-215ENST00000593110 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
TUBD1-215ENST00000593110 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
TUBD1-215ENST00000593110 COL6A3P12111 3177 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
TUBD1-215ENST00000593110 CAP1Q01518 475 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 SREBF2Q12772 1141 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.41
TUBD1-215ENST00000593110 ARMC5Q96C12 935 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 A0A0C4DFX4 3053 aa12.46□□□□□ -0.41
TUBD1-215ENST00000593110 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.42
TUBD1-215ENST00000593110 SSC5DA1L4H1 1573 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 UFL1O94874 794 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
TUBD1-215ENST00000593110 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
TUBD1-215ENST00000593110 EN2P19622 333 aaPredicted RBP12.44□□□□□ -0.42
TUBD1-215ENST00000593110 PTPN12Q05209 780 aaKnown RBP12.44□□□□□ -0.42
TUBD1-215ENST00000593110 AIMP1Q12904 312 aaKnown RBP12.44□□□□□ -0.42
TUBD1-215ENST00000593110 LDLRAD1Q5T700 205 aa12.44□□□□□ -0.42
TUBD1-215ENST00000593110 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
TUBD1-215ENST00000593110 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
TUBD1-215ENST00000593110 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
TUBD1-215ENST00000593110 LAMA3Q16787 3333 aa12.44□□□□□ -0.42
TUBD1-215ENST00000593110 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
TUBD1-215ENST00000593110 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
TUBD1-215ENST00000593110 IGF2BP3O00425 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
TUBD1-215ENST00000593110 WNT10BO00744 389 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 RGS20O76081 388 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 JUNDP17535 347 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 MMP16P51512 607 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 QPCTQ16769 361 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
TUBD1-215ENST00000593110 FCF1Q9Y324 198 aaKnown RBP12.42□□□□□ -0.42
TUBD1-215ENST00000593110 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
TUBD1-215ENST00000593110 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
TUBD1-215ENST00000593110 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
TUBD1-215ENST00000593110 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-215ENST00000593110 OTOFQ9HC10 1997 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-215ENST00000593110 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-215ENST00000593110 LILRB3O75022 631 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 CD99L2Q8TCZ2 262 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-215ENST00000593110 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 MXD3Q9BW11 206 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
TUBD1-215ENST00000593110 MANSC4A6NHS7 340 aaPredicted RBP12.39□□□□□ -0.43
TUBD1-215ENST00000593110 SASH1O94885 1247 aa12.39□□□□□ -0.43
TUBD1-215ENST00000593110 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
TUBD1-215ENST00000593110 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
TUBD1-215ENST00000593110 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
TUBD1-215ENST00000593110 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
TUBD1-215ENST00000593110 XDHP47989 1333 aa12.38□□□□□ -0.43
TUBD1-215ENST00000593110 ZBTB48P10074 688 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-215ENST00000593110 NF2P35240 595 aa12.38□□□□□ -0.43
TUBD1-215ENST00000593110 ARMC9Q7Z3E5 817 aa12.38□□□□□ -0.43
TUBD1-215ENST00000593110 TSC1Q92574 1164 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms