RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 TESPA1A2RU30 521 aaPredicted RBP28.82■■■□□ 2.2
MBD3-211ENST00000592965 RASGRF1Q13972 1273 aa28.82■■■□□ 2.2
MBD3-211ENST00000592965 PKN2Q16513 984 aaKnown RBP28.82■■■□□ 2.2
MBD3-211ENST00000592965 CSADQ9Y600 493 aa28.82■■■□□ 2.2
MBD3-211ENST00000592965 ZBED9Q6R2W3 1325 aa28.82■■■□□ 2.2
MBD3-211ENST00000592965 AK9Q5TCS8 1911 aa28.81■■■□□ 2.2
MBD3-211ENST00000592965 FKTNO75072 461 aa28.81■■■□□ 2.2
MBD3-211ENST00000592965 MVPQ14764 893 aaKnown RBP28.81■■■□□ 2.2
MBD3-211ENST00000592965 CDC42EP5Q6NZY7 148 aa28.81■■■□□ 2.2
MBD3-211ENST00000592965 XAGE2Q96GT9 111 aa28.81■■■□□ 2.2
MBD3-211ENST00000592965 PNMA6EA0A0J9YXQ4 647 aa28.8■■■□□ 2.2
MBD3-211ENST00000592965 OTUD7BQ6GQQ9 843 aa28.8■■■□□ 2.2
MBD3-211ENST00000592965 DCAF15Q66K64 600 aa28.79■■■□□ 2.2
MBD3-211ENST00000592965 FAM151AQ8WW52 585 aa28.79■■■□□ 2.2
MBD3-211ENST00000592965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.79■■■□□ 2.2
MBD3-211ENST00000592965 CNKSR2Q8WXI2 1034 aa28.78■■■□□ 2.2
MBD3-211ENST00000592965 MS4A4AQ96JQ5 239 aa28.78■■■□□ 2.2
MBD3-211ENST00000592965 GAKO14976 1311 aa28.77■■■□□ 2.2
MBD3-211ENST00000592965 SPDYE5A6NIY4 337 aa28.77■■■□□ 2.2
MBD3-211ENST00000592965 WRNIP1Q96S55 665 aa28.77■■■□□ 2.2
MBD3-211ENST00000592965 PTPN18Q99952 460 aa28.77■■■□□ 2.2
MBD3-211ENST00000592965 SNCAIPQ9Y6H5 919 aa28.77■■■□□ 2.2
MBD3-211ENST00000592965 NFIAQ12857 509 aa28.76■■■□□ 2.19
MBD3-211ENST00000592965 G3BP1Q13283 466 aaKnown RBP eCLIP28.76■■■□□ 2.19
MBD3-211ENST00000592965 FTSJ3Q8IY81 847 aaKnown RBP28.76■■■□□ 2.19
MBD3-211ENST00000592965 GTF2A2P52657 109 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 POLA2Q14181 598 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 SPTY2D1Q68D10 685 aaPredicted RBP28.75■■■□□ 2.19
MBD3-211ENST00000592965 DZIP1Q86YF9 867 aaKnown RBP28.75■■■□□ 2.19
MBD3-211ENST00000592965 OTUD5Q96G74 571 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 NEUROD6Q96NK8 337 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 ZNF341Q9BYN7 854 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 USP40Q9NVE5 1235 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 FAM198AQ9UFP1 575 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 DOCK2Q92608 1830 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 RFX7Q2KHR2 1363 aa28.75■■■□□ 2.19
MBD3-211ENST00000592965 HTTP42858 3142 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 CRHR2Q13324 411 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 ERO1BQ86YB8 467 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 SLF2Q8IX21 1173 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 BRI3BPQ8WY22 251 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 HPS5Q9UPZ3 1129 aa28.74■■■□□ 2.19
MBD3-211ENST00000592965 MLLT1Q03111 559 aaPredicted RBP28.73■■■□□ 2.19
MBD3-211ENST00000592965 TCP10Q12799 353 aa28.73■■■□□ 2.19
MBD3-211ENST00000592965 SSH3Q8TE77 659 aa28.73■■■□□ 2.19
MBD3-211ENST00000592965 ZKSCAN4Q969J2 545 aaPredicted RBP28.73■■■□□ 2.19
MBD3-211ENST00000592965 FAM163AQ96GL9 167 aaPredicted RBP28.73■■■□□ 2.19
MBD3-211ENST00000592965 ABCF2Q9UG63 623 aa28.73■■■□□ 2.19
MBD3-211ENST00000592965 CCL15-CCL14A0A0B4J2E2 113 aa28.72■■■□□ 2.19
MBD3-211ENST00000592965 RLBP1P12271 317 aa28.72■■■□□ 2.19
MBD3-211ENST00000592965 CCL15Q16663 113 aa28.72■■■□□ 2.19
MBD3-211ENST00000592965 FBXO46Q6PJ61 603 aaPredicted RBP28.72■■■□□ 2.19
MBD3-211ENST00000592965 ARID4AP29374 1257 aaPredicted RBP28.71■■■□□ 2.19
MBD3-211ENST00000592965 GORABQ5T7V8 394 aa28.71■■■□□ 2.19
MBD3-211ENST00000592965 MIGA2Q7L4E1 593 aa28.71■■■□□ 2.19
MBD3-211ENST00000592965 ITPRIPQ8IWB1 547 aa28.71■■■□□ 2.19
MBD3-211ENST00000592965 IDI2Q9BXS1 227 aa28.71■■■□□ 2.19
MBD3-211ENST00000592965 HMG20BQ9P0W2 317 aa28.71■■■□□ 2.19
MBD3-211ENST00000592965 TNRC18O15417 2968 aaPredicted RBP28.7■■■□□ 2.19
MBD3-211ENST00000592965 ATP8B2P98198 1209 aa28.7■■■□□ 2.18
MBD3-211ENST00000592965 PPIL2Q13356 520 aa28.7■■■□□ 2.18
MBD3-211ENST00000592965 SPATA5Q8NB90 893 aa28.7■■■□□ 2.18
MBD3-211ENST00000592965 GPR108Q9NPR9 543 aa28.7■■■□□ 2.18
MBD3-211ENST00000592965 ZNF112Q9UJU3 913 aa28.7■■■□□ 2.18
MBD3-211ENST00000592965 MROH7-TTC4A0A0A0MT08 1334 aa28.69■■■□□ 2.18
MBD3-211ENST00000592965 ENTPD3O75355 529 aa28.69■■■□□ 2.18
MBD3-211ENST00000592965 ERICH6Q7L0X2 663 aa28.69■■■□□ 2.18
MBD3-211ENST00000592965 ATRNL1Q5VV63 1379 aa28.69■■■□□ 2.18
MBD3-211ENST00000592965 ZBTB7BO15156 539 aaPredicted RBP28.68■■■□□ 2.18
MBD3-211ENST00000592965 INPP5BP32019 993 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 RGS3P49796 1198 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 MECOMQ03112 1051 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 ERO1AQ96HE7 468 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 C1orf115Q9H7X2 142 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 PDE4DIPQ5VU43 2346 aa28.68■■■□□ 2.18
MBD3-211ENST00000592965 IRF6O14896 467 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 CETPP11597 493 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 PPATQ06203 517 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 SNAPC2Q13487 334 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 PI16Q6UXB8 463 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 ZFPM1Q8IX07 1006 aa28.67■■■□□ 2.18
MBD3-211ENST00000592965 ZCCHC17Q9NP64 241 aaKnown RBP28.67■■■□□ 2.18
MBD3-211ENST00000592965 UQCRFS1P1P0C7P4 283 aa28.66■■■□□ 2.18
MBD3-211ENST00000592965 BTDP43251 543 aa28.66■■■□□ 2.18
MBD3-211ENST00000592965 SOX10P56693 466 aa28.66■■■□□ 2.18
MBD3-211ENST00000592965 FAM43AQ8N2R8 423 aa28.66■■■□□ 2.18
MBD3-211ENST00000592965 ZNF384Q8TF68 577 aa28.66■■■□□ 2.18
MBD3-211ENST00000592965 MAST2Q6P0Q8 1798 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 GPR75-ASB3A0A0A6YYF3 556 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 WDHD1O75717 1129 aaPredicted RBP28.65■■■□□ 2.18
MBD3-211ENST00000592965 MCAMP43121 646 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 OS9Q13438 667 aaPredicted RBP28.65■■■□□ 2.18
MBD3-211ENST00000592965 TAF1CQ15572 869 aaPredicted RBP28.65■■■□□ 2.18
MBD3-211ENST00000592965 TNNI3KQ59H18 835 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 NOL9Q5SY16 702 aaKnown RBP28.65■■■□□ 2.18
MBD3-211ENST00000592965 OTOP1Q7RTM1 612 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 NOP58Q9Y2X3 529 aaKnown RBP28.65■■■□□ 2.18
MBD3-211ENST00000592965 TRIM17Q9Y577 477 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 FPGT-TNNI3KV9GXZ4 949 aa28.65■■■□□ 2.18
MBD3-211ENST00000592965 SURF6O75683 361 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms