RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, human

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51D-223	ENST00000592928	SLC10A4	Q96EP9	437 aa		11.92	□□□□□ -0.5
RAD51D-223	ENST00000592928	ABHD8	Q96I13	439 aa		11.92	□□□□□ -0.5
RAD51D-223	ENST00000592928	C1orf115	Q9H7X2	142 aa		11.92	□□□□□ -0.5
RAD51D-223	ENST00000592928	NOP58	Q9Y2X3	529 aa	Known RBP	11.92	□□□□□ -0.5
RAD51D-223	ENST00000592928	DOCK2	Q92608	1830 aa		11.91	□□□□□ -0.5
RAD51D-223	ENST00000592928	CAPN15	O75808	1086 aa		11.91	□□□□□ -0.5
RAD51D-223	ENST00000592928	MKRN3	Q13064	507 aa	Known RBP	11.91	□□□□□ -0.5
RAD51D-223	ENST00000592928	ALDH1A1	P00352	501 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	GJA5	P36382	358 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	VGLL4	Q14135	290 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	TNNI3K	Q59H18	835 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	CDC42EP5	Q6NZY7	148 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	CEP85	Q6P2H3	762 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	DZIP1	Q86YF9	867 aa	Known RBP	11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	SLF2	Q8IX21	1173 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	FAM151A	Q8WW52	585 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	FAM163A	Q96GL9	167 aa	Predicted RBP	11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	NEUROD6	Q96NK8	337 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	MCOLN1	Q9GZU1	580 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	HMG20B	Q9P0W2	317 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	FPGT-TNNI3K	V9GXZ4	949 aa		11.9	□□□□□ -0.5
RAD51D-223	ENST00000592928	MROH7-TTC4	A0A0A0MT08	1334 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	TESPA1	A2RU30	521 aa	Predicted RBP	11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	SURF6	O75683	361 aa	Known RBP	11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	UQCRFS1P1	P0C7P4	283 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	MAP3K9	P80192	1104 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	NFIA	Q12857	509 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	OS9	Q13438	667 aa	Predicted RBP	11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	GORAB	Q5T7V8	394 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	DCAF15	Q66K64	600 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	SPATA5	Q8NB90	893 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	PANK1	Q8TE04	598 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	OPTN	Q96CV9	577 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	IDI2	Q9BXS1	227 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	ABCF2	Q9UG63	623 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	CSAD	Q9Y600	493 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	ATRNL1	Q5VV63	1379 aa		11.89	□□□□□ -0.51
RAD51D-223	ENST00000592928	SPDYE5	A6NIY4	337 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	IGSF3	O75054	1194 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	ENTPD3	O75355	529 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	MCAM	P43121	646 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	DGKZ	Q13574	1117 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	ERICH6	Q7L0X2	663 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	CTU1	Q7Z7A3	348 aa	Known RBP	11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	IFNL1	Q8IU54	200 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	WRNIP1	Q96S55	665 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZNF341	Q9BYN7	854 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	ELP3	Q9H9T3	547 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	FAM198A	Q9UFP1	575 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	RCAN3	Q9UKA8	241 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	DDX19B	Q9UMR2	479 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	SNCAIP	Q9Y6H5	919 aa		11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	COL2A1	P02458	1487 aa	Predicted RBP	11.88	□□□□□ -0.51
RAD51D-223	ENST00000592928	GPR25	O00155	361 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	TBC1D8	O95759	1140 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	MAP4K4	O95819	1239 aa	Predicted RBP	11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	MECOM	Q03112	1051 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	PI16	Q6UXB8	463 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	ERC1	Q8IUD2	1116 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZNF384	Q8TF68	577 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	NSUN4	Q96CB9	384 aa	Known RBP	11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	MS4A4A	Q96JQ5	239 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	DBNDD2	Q9BQY9	259 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	USP40	Q9NVE5	1235 aa		11.87	□□□□□ -0.51
RAD51D-223	ENST00000592928	GPR75-ASB3	A0A0A6YYF3	556 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	NPM3	O75607	178 aa	Known RBP	11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	WDHD1	O75717	1129 aa	Predicted RBP	11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	BTD	P43251	543 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	RGS3	P49796	1198 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	GSTO1	P78417	241 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	TCP10	Q12799	353 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	CCDC158	Q5M9N0	1113 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	TTC39A	Q5SRH9	613 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	NOL9	Q5SY16	702 aa	Known RBP	11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	ERO1B	Q86YB8	467 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZNF112	Q9UJU3	913 aa		11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	DBNL	Q9UJU6	430 aa	Known RBP	11.86	□□□□□ -0.51
RAD51D-223	ENST00000592928	LDHC	P07864	332 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	GTF2A2	P52657	109 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	RHBDL3	P58872	404 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	PPIL2	Q13356	520 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	HSP90AB4P	Q58FF6	505 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	OTUD7B	Q6GQQ9	843 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	CNKSR2	Q8WXI2	1034 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	BRI3BP	Q8WY22	251 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	OTUD5	Q96G74	571 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	CHMP4B	Q9H444	224 aa	Known RBP	11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZCCHC17	Q9NP64	241 aa	Known RBP	11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	ZBTB40	Q9NUA8	1239 aa		11.85	□□□□□ -0.51
RAD51D-223	ENST00000592928	CCL15-CCL14	A0A0B4J2E2	113 aa		11.84	□□□□□ -0.51
RAD51D-223	ENST00000592928	FKTN	O75072	461 aa		11.84	□□□□□ -0.51
RAD51D-223	ENST00000592928	INPP5B	P32019	993 aa		11.84	□□□□□ -0.51
RAD51D-223	ENST00000592928	MAP3K10	Q02779	954 aa		11.84	□□□□□ -0.51
RAD51D-223	ENST00000592928	PPAT	Q06203	517 aa		11.84	□□□□□ -0.51

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