RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
APOC1-208ENST00000592535 GJA5P36382 358 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
APOC1-208ENST00000592535 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
APOC1-208ENST00000592535 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 ELP3Q9H9T3 547 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
APOC1-208ENST00000592535 MS4A1P11836 297 aa17.1■□□□□ 0.33
APOC1-208ENST00000592535 NFIAQ12857 509 aa17.1■□□□□ 0.33
APOC1-208ENST00000592535 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
APOC1-208ENST00000592535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.1■□□□□ 0.334e-15■■■□□ 17.6
APOC1-208ENST00000592535 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
APOC1-208ENST00000592535 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
APOC1-208ENST00000592535 GAKO14976 1311 aa17.1■□□□□ 0.33
APOC1-208ENST00000592535 MCAMP43121 646 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 MAP3K9P80192 1104 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 TCP10Q12799 353 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 DGKZQ13574 1117 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
APOC1-208ENST00000592535 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 FAM151AQ8WW52 585 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 MCOLN1Q9GZU1 580 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 DOCK2Q92608 1830 aa17.09■□□□□ 0.33
APOC1-208ENST00000592535 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
APOC1-208ENST00000592535 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 VGLL4Q14135 290 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 OPTNQ96CV9 577 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 FAM198AQ9UFP1 575 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 COG6Q9Y2V7 657 aa17.08■□□□□ 0.32
APOC1-208ENST00000592535 MROH7-TTC4A0A0A0MT08 1334 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
APOC1-208ENST00000592535 INHBEP58166 350 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 MECOMQ03112 1051 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 TTC39AQ5SRH9 613 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
APOC1-208ENST00000592535 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 CSADQ9Y600 493 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
APOC1-208ENST00000592535 RFX7Q2KHR2 1363 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 BTDP43251 543 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 ZFPM1Q8IX07 1006 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 R3HDMLQ9H3Y0 253 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
APOC1-208ENST00000592535 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 SNCAIPQ9Y6H5 919 aa17.06■□□□□ 0.32
APOC1-208ENST00000592535 GPR25O00155 361 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 RGS3P49796 1198 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 ZNF296Q8WUU4 475 aaPredicted RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 EAF2Q96CJ1 260 aaPredicted RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 OTUD5Q96G74 571 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 CFHR5Q9BXR6 569 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
APOC1-208ENST00000592535 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
APOC1-208ENST00000592535 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
APOC1-208ENST00000592535 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
APOC1-208ENST00000592535 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
APOC1-208ENST00000592535 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
APOC1-208ENST00000592535 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
APOC1-208ENST00000592535 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
APOC1-208ENST00000592535 ENTPD3O75355 529 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
APOC1-208ENST00000592535 INPP5BP32019 993 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 RHBDL3P58872 404 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 GSTO1P78417 241 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 NOM1Q5C9Z4 860 aaKnown RBP17.03■□□□□ 0.32
APOC1-208ENST00000592535 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
APOC1-208ENST00000592535 PTPN18Q99952 460 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
APOC1-208ENST00000592535 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 LDHCP07864 332 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 PICALMQ13492 652 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 SH3BP5LQ7L8J4 393 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 ERO1BQ86YB8 467 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms