RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NSUN4Q96CB9 384 aaKnown RBP14.11□□□□□ -0.15
VMP1-211ENST00000591315 EDC3Q96F86 508 aaKnown RBP14.11□□□□□ -0.15
VMP1-211ENST00000591315 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
VMP1-211ENST00000591315 CAPNS2Q96L46 248 aa14.11□□□□□ -0.15
VMP1-211ENST00000591315 TEPSINQ96N21 525 aa14.11□□□□□ -0.15
VMP1-211ENST00000591315 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
VMP1-211ENST00000591315 GAKO14976 1311 aa14.11□□□□□ -0.15
VMP1-211ENST00000591315 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
VMP1-211ENST00000591315 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
VMP1-211ENST00000591315 ZGPATQ8N5A5 531 aaKnown RBP14.1□□□□□ -0.15
VMP1-211ENST00000591315 JMYQ8N9B5 988 aa14.1□□□□□ -0.15
VMP1-211ENST00000591315 OTUD7AQ8TE49 926 aaPredicted RBP14.1□□□□□ -0.15
VMP1-211ENST00000591315 USP40Q9NVE5 1235 aa14.1□□□□□ -0.15
VMP1-211ENST00000591315 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.1□□□□□ -0.15
VMP1-211ENST00000591315 LRP2BPQ9P2M1 347 aa14.1□□□□□ -0.15
VMP1-211ENST00000591315 WDR33Q9C0J8 1336 aaKnown RBP14.1□□□□□ -0.15
VMP1-211ENST00000591315 BTDP43251 543 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 TCP10Q12799 353 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 TTLL12Q14166 644 aaPredicted RBP14.09□□□□□ -0.15
VMP1-211ENST00000591315 ADGRA1Q86SQ6 560 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 MROH7-TTC4A0A0A0MT08 1334 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 PAPPA2Q9BXP8 1791 aa14.09□□□□□ -0.15
VMP1-211ENST00000591315 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
VMP1-211ENST00000591315 FAM163AQ96GL9 167 aaPredicted RBP14.08□□□□□ -0.16
VMP1-211ENST00000591315 BOLA2Q9H3K6 86 aa14.08□□□□□ -0.16
VMP1-211ENST00000591315 AK9Q5TCS8 1911 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 GPR75-ASB3A0A0A6YYF3 556 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 FAM155AB1AL88 458 aaPredicted RBP14.07□□□□□ -0.16
VMP1-211ENST00000591315 IGHDP01880 384 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 CHGBP05060 677 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 RHBDL3P58872 404 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 SLFNL1Q499Z3 407 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 RGMBQ6NW40 437 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
VMP1-211ENST00000591315 DNAJC2Q99543 621 aaKnown RBP14.07□□□□□ -0.16
VMP1-211ENST00000591315 DDX4Q9NQI0 724 aaKnown RBP14.07□□□□□ -0.16
VMP1-211ENST00000591315 ANGEL1Q9UNK9 670 aaKnown RBP14.07□□□□□ -0.16
VMP1-211ENST00000591315 GOLIM4O00461 696 aa14.06□□□□□ -0.16
VMP1-211ENST00000591315 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 WDHD1O75717 1129 aaPredicted RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 RGS3P49796 1198 aa14.06□□□□□ -0.16
VMP1-211ENST00000591315 ZNF157P51786 506 aaPredicted RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 TNFAIP1Q13829 316 aa14.06□□□□□ -0.16
VMP1-211ENST00000591315 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
VMP1-211ENST00000591315 TMOD2Q9NZR1 351 aa14.06□□□□□ -0.16
VMP1-211ENST00000591315 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
VMP1-211ENST00000591315 ATP5JP18859 108 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 NF2P35240 595 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 DYNLL1P63167 89 aaKnown RBP14.05□□□□□ -0.16
VMP1-211ENST00000591315 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
VMP1-211ENST00000591315 SUPT20HL1Q3ZLR7 823 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 LDLRAD1Q5T700 205 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 FKBP1CQ5VVH2 108 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 SH3BP5LQ7L8J4 393 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 FAM83AQ86UY5 434 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 SH3RF3Q8TEJ3 882 aaPredicted RBP14.05□□□□□ -0.16
VMP1-211ENST00000591315 HHIPL1Q96JK4 782 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 AATFQ9NY61 560 aaKnown RBP eCLIP14.05□□□□□ -0.16
VMP1-211ENST00000591315 DOCK2Q92608 1830 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 RFX7Q2KHR2 1363 aa14.05□□□□□ -0.16
VMP1-211ENST00000591315 MAST2Q6P0Q8 1798 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 LDHCP07864 332 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 CYP7A1P22680 504 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 ECE1P42892 770 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 TNNI2P48788 182 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 FKBP1BP68106 108 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 GSTO1P78417 241 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 PICALMQ13492 652 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 ANKRD45Q5TZF3 282 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 MIGA2Q7L4E1 593 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 RASAL3Q86YV0 1011 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 FAM151AQ8WW52 585 aa14.04□□□□□ -0.16
VMP1-211ENST00000591315 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 DDTLA6NHG4 134 aaPredicted RBP14.03□□□□□ -0.16
VMP1-211ENST00000591315 SLC10A3P09131 477 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 HSPA1AP0DMV8 641 aaKnown RBP14.03□□□□□ -0.16
VMP1-211ENST00000591315 HSPA1BP0DMV9 641 aaKnown RBP14.03□□□□□ -0.16
VMP1-211ENST00000591315 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
VMP1-211ENST00000591315 B4GALNT3Q6L9W6 998 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.03□□□□□ -0.16
VMP1-211ENST00000591315 HAUS7Q99871 368 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 IDI2Q9BXS1 227 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 ECHDC1Q9NTX5 307 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
VMP1-211ENST00000591315 THSD7BQ9C0I4 1608 aa14.02□□□□□ -0.16
VMP1-211ENST00000591315 PPP1R12BO60237 982 aaPredicted RBP14.02□□□□□ -0.17
VMP1-211ENST00000591315 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.17
VMP1-211ENST00000591315 PDE6AP16499 860 aa14.02□□□□□ -0.17
VMP1-211ENST00000591315 MAP3K11Q16584 847 aa14.02□□□□□ -0.17
VMP1-211ENST00000591315 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.17
VMP1-211ENST00000591315 TEX11Q8IYF3 940 aa14.02□□□□□ -0.17
VMP1-211ENST00000591315 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.17
VMP1-211ENST00000591315 FAM196BA6NMK8 535 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms