RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 IL1RAPL2Q9NP60 686 aa27.45■■□□□ 1.98
MBD3-208ENST00000590830 GAKO14976 1311 aa27.44■■□□□ 1.98
MBD3-208ENST00000590830 APBB1O00213 710 aa27.44■■□□□ 1.98
MBD3-208ENST00000590830 ERICH6Q7L0X2 663 aa27.44■■□□□ 1.98
MBD3-208ENST00000590830 FAM163AQ96GL9 167 aaPredicted RBP27.44■■□□□ 1.98
MBD3-208ENST00000590830 TNNI2P48788 182 aa27.43■■□□□ 1.98
MBD3-208ENST00000590830 FAM83AQ86UY5 434 aa27.43■■□□□ 1.98
MBD3-208ENST00000590830 AACSQ86V21 672 aa27.43■■□□□ 1.98
MBD3-208ENST00000590830 DZIP1Q86YF9 867 aaKnown RBP27.43■■□□□ 1.98
MBD3-208ENST00000590830 AIDAQ96BJ3 306 aa27.43■■□□□ 1.98
MBD3-208ENST00000590830 USP40Q9NVE5 1235 aa27.43■■□□□ 1.98
MBD3-208ENST00000590830 PPP1R12BO60237 982 aaPredicted RBP27.42■■□□□ 1.98
MBD3-208ENST00000590830 NFIAQ12857 509 aa27.42■■□□□ 1.98
MBD3-208ENST00000590830 COL13A1Q5TAT6 717 aaPredicted RBP27.42■■□□□ 1.98
MBD3-208ENST00000590830 TMOD2Q9NZR1 351 aa27.42■■□□□ 1.98
MBD3-208ENST00000590830 CYP2E1P05181 493 aaPredicted RBP27.41■■□□□ 1.98
MBD3-208ENST00000590830 NSUN4Q96CB9 384 aaKnown RBP27.41■■□□□ 1.98
MBD3-208ENST00000590830 KIF1BPQ96EK5 621 aa27.41■■□□□ 1.98
MBD3-208ENST00000590830 CLMNQ96JQ2 1002 aa27.41■■□□□ 1.98
MBD3-208ENST00000590830 CSRNP1Q96S65 589 aa27.41■■□□□ 1.98
MBD3-208ENST00000590830 RAB11FIP3O75154 756 aa27.4■■□□□ 1.98
MBD3-208ENST00000590830 HSPA8P11142 646 aaKnown RBP27.4■■□□□ 1.98
MBD3-208ENST00000590830 ZAP70P43403 619 aa27.4■■□□□ 1.98
MBD3-208ENST00000590830 CTCFP49711 727 aaPredicted RBP27.4■■□□□ 1.98
MBD3-208ENST00000590830 FAM198AQ9UFP1 575 aa27.4■■□□□ 1.98
MBD3-208ENST00000590830 ZFPM1Q8IX07 1006 aa27.39■■□□□ 1.98
MBD3-208ENST00000590830 RAI14Q9P0K7 980 aa27.39■■□□□ 1.98
MBD3-208ENST00000590830 MROH7-TTC4A0A0A0MT08 1334 aa27.39■■□□□ 1.97
MBD3-208ENST00000590830 GPR75-ASB3A0A0A6YYF3 556 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 LBX1P52954 281 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 TCP10Q12799 353 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 SLF2Q8IX21 1173 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 FAM151AQ8WW52 585 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 PIH1D3Q9NQM4 214 aaKnown RBP27.38■■□□□ 1.97
MBD3-208ENST00000590830 LRP2BPQ9P2M1 347 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 PCDHB15Q9Y5E8 787 aa27.38■■□□□ 1.97
MBD3-208ENST00000590830 BTDP43251 543 aa27.37■■□□□ 1.97
MBD3-208ENST00000590830 MKRN3Q13064 507 aaKnown RBP27.37■■□□□ 1.97
MBD3-208ENST00000590830 TSKSQ9UJT2 592 aa27.37■■□□□ 1.97
MBD3-208ENST00000590830 NDUFB9Q9Y6M9 179 aa27.37■■□□□ 1.97
MBD3-208ENST00000590830 AKAP11Q9UKA4 1901 aa27.37■■□□□ 1.97
MBD3-208ENST00000590830 IREB2P48200 963 aaKnown RBP27.36■■□□□ 1.97
MBD3-208ENST00000590830 RHBDL3P58872 404 aa27.36■■□□□ 1.97
MBD3-208ENST00000590830 CLASRPQ8N2M8 674 aaKnown RBP27.36■■□□□ 1.97
MBD3-208ENST00000590830 SLC10A4Q96EP9 437 aa27.36■■□□□ 1.97
MBD3-208ENST00000590830 CRBNQ96SW2 442 aa27.36■■□□□ 1.97
MBD3-208ENST00000590830 BEGAINQ9BUH8 593 aa27.36■■□□□ 1.97
MBD3-208ENST00000590830 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.36■■□□□ 1.97
MBD3-208ENST00000590830 IDI2Q9BXS1 227 aa27.35■■□□□ 1.97
MBD3-208ENST00000590830 MYH2Q9UKX2 1941 aa27.35■■□□□ 1.97
MBD3-208ENST00000590830 UNCXA6NJT0 531 aa27.34■■□□□ 1.97
MBD3-208ENST00000590830 WDHD1O75717 1129 aaPredicted RBP27.34■■□□□ 1.97
MBD3-208ENST00000590830 GSTO1P78417 241 aa27.34■■□□□ 1.97
MBD3-208ENST00000590830 SPRYD7Q5W111 196 aa27.34■■□□□ 1.97
MBD3-208ENST00000590830 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.34■■□□□ 1.97
MBD3-208ENST00000590830 BCL11AQ9H165 835 aa27.34■■□□□ 1.97
MBD3-208ENST00000590830 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
MBD3-208ENST00000590830 LDHCP07864 332 aa27.33■■□□□ 1.97
MBD3-208ENST00000590830 RGS3P49796 1198 aa27.33■■□□□ 1.97
MBD3-208ENST00000590830 ANKRD13AQ8IZ07 590 aa27.33■■□□□ 1.97
MBD3-208ENST00000590830 ANTXR1Q9H6X2 564 aa27.33■■□□□ 1.97
MBD3-208ENST00000590830 DDX4Q9NQI0 724 aaKnown RBP27.33■■□□□ 1.97
MBD3-208ENST00000590830 PRDM10Q9NQV6 1147 aa27.33■■□□□ 1.97
MBD3-208ENST00000590830 SMARCA5O60264 1052 aaPredicted RBP27.32■■□□□ 1.96
MBD3-208ENST00000590830 MIGA2Q7L4E1 593 aa27.32■■□□□ 1.96
MBD3-208ENST00000590830 SH3BP5LQ7L8J4 393 aa27.32■■□□□ 1.96
MBD3-208ENST00000590830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.32■■□□□ 1.96
MBD3-208ENST00000590830 DCTPP1Q9H773 170 aa27.32■■□□□ 1.96
MBD3-208ENST00000590830 RNF186Q9NXI6 227 aa27.32■■□□□ 1.96
MBD3-208ENST00000590830 RPAP1Q9BWH6 1393 aaPredicted RBP27.32■■□□□ 1.96
MBD3-208ENST00000590830 IFIT2P09913 472 aaKnown RBP27.31■■□□□ 1.96
MBD3-208ENST00000590830 GJA5P36382 358 aa27.31■■□□□ 1.96
MBD3-208ENST00000590830 MAP3K9P80192 1104 aa27.31■■□□□ 1.96
MBD3-208ENST00000590830 ADGRA1Q86SQ6 560 aa27.31■■□□□ 1.96
MBD3-208ENST00000590830 WNK4Q96J92 1243 aa27.31■■□□□ 1.96
MBD3-208ENST00000590830 CA12O43570 354 aa27.3■■□□□ 1.96
MBD3-208ENST00000590830 ENTPD3O75355 529 aa27.3■■□□□ 1.96
MBD3-208ENST00000590830 TM4SF4P48230 202 aa27.3■■□□□ 1.96
MBD3-208ENST00000590830 NAA16Q6N069 864 aaPredicted RBP27.3■■□□□ 1.96
MBD3-208ENST00000590830 REM2Q8IYK8 340 aaPredicted RBP27.3■■□□□ 1.96
MBD3-208ENST00000590830 ELP3Q9H9T3 547 aa27.3■■□□□ 1.96
MBD3-208ENST00000590830 VGLL4Q14135 290 aa27.29■■□□□ 1.96
MBD3-208ENST00000590830 LRRCC1Q9C099 1032 aa27.29■■□□□ 1.96
MBD3-208ENST00000590830 TRPA1O75762 1119 aa27.28■■□□□ 1.96
MBD3-208ENST00000590830 CNKSR2Q8WXI2 1034 aa27.28■■□□□ 1.96
MBD3-208ENST00000590830 HOOK2Q96ED9 719 aa27.28■■□□□ 1.96
MBD3-208ENST00000590830 DDTLA6NHG4 134 aaPredicted RBP27.27■■□□□ 1.96
MBD3-208ENST00000590830 PICALMQ13492 652 aa27.27■■□□□ 1.96
MBD3-208ENST00000590830 SH3RF3Q8TEJ3 882 aaPredicted RBP27.27■■□□□ 1.96
MBD3-208ENST00000590830 ZKSCAN4Q969J2 545 aaPredicted RBP27.27■■□□□ 1.96
MBD3-208ENST00000590830 ATRNL1Q5VV63 1379 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 IDH1O75874 414 aaKnown RBP27.26■■□□□ 1.95
MBD3-208ENST00000590830 SLURP2P0DP57 97 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 ZBTB48P10074 688 aaPredicted RBP27.26■■□□□ 1.95
MBD3-208ENST00000590830 PPP4CP60510 307 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 DCAF15Q66K64 600 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.26■■□□□ 1.95
MBD3-208ENST00000590830 WRNIP1Q96S55 665 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 ZNF341Q9BYN7 854 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 SAGE1Q9NXZ1 904 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms