RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 FAM83AQ86UY5 434 aa14.51□□□□□ -0.09
LIG3-213ENST00000590630 JMYQ8N9B5 988 aa14.51□□□□□ -0.09
LIG3-213ENST00000590630 ZNF384Q8TF68 577 aa14.51□□□□□ -0.09
LIG3-213ENST00000590630 GCC1Q96CN9 775 aa14.51□□□□□ -0.09
LIG3-213ENST00000590630 MYH7P12883 1935 aa14.51□□□□□ -0.09
LIG3-213ENST00000590630 GPR75-ASB3A0A0A6YYF3 556 aa14.5□□□□□ -0.09
LIG3-213ENST00000590630 ATP5JP18859 108 aa14.5□□□□□ -0.09
LIG3-213ENST00000590630 CACNB3P54284 484 aa14.5□□□□□ -0.09
LIG3-213ENST00000590630 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
LIG3-213ENST00000590630 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
LIG3-213ENST00000590630 RWDD1Q9H446 243 aaPredicted RBP14.5□□□□□ -0.09
LIG3-213ENST00000590630 THSD7BQ9C0I4 1608 aa14.5□□□□□ -0.09
LIG3-213ENST00000590630 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 CDK5RAP2Q96SN8 1893 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 SSC5DA1L4H1 1573 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 MAP4K4O95819 1239 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 BTDP43251 543 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 VEGFBP49765 207 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 TTLL12Q14166 644 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 NAA16Q6N069 864 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 CAPNS2Q96L46 248 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 TEPSINQ96N21 525 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 TMEM39BQ9GZU3 492 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 USP40Q9NVE5 1235 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
LIG3-213ENST00000590630 FOCADQ5VW36 1801 aa14.49□□□□□ -0.09
LIG3-213ENST00000590630 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
LIG3-213ENST00000590630 PPP1R12BO60237 982 aaPredicted RBP14.48□□□□□ -0.09
LIG3-213ENST00000590630 IDH1O75874 414 aaKnown RBP14.48□□□□□ -0.09
LIG3-213ENST00000590630 MAP3K12Q12852 859 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 NBPF12Q5TAG4 269 aaPredicted RBP14.48□□□□□ -0.09
LIG3-213ENST00000590630 RGMBQ6NW40 437 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 HOOK2Q96ED9 719 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 NOL10Q9BSC4 688 aaKnown RBP14.48□□□□□ -0.09
LIG3-213ENST00000590630 IDI2Q9BXS1 227 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 ECHDC1Q9NTX5 307 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
LIG3-213ENST00000590630 RFX7Q2KHR2 1363 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 CYP4F22Q6NT55 531 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
LIG3-213ENST00000590630 HAUS7Q99871 368 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 ANTXR1Q9H6X2 564 aa14.47□□□□□ -0.09
LIG3-213ENST00000590630 UNCXA6NJT0 531 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 GOLIM4O00461 696 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 ENTPD3O75355 529 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 BAG3O95817 575 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 PLCG2P16885 1265 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 ZNF157P51786 506 aaPredicted RBP14.46□□□□□ -0.09
LIG3-213ENST00000590630 RHBDL3P58872 404 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 IRX6P78412 446 aaPredicted RBP14.46□□□□□ -0.09
LIG3-213ENST00000590630 NFIAQ12857 509 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 MAP3K11Q16584 847 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 MOB2Q70IA6 237 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 CCDC102AQ96A19 550 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 BOLA2Q9H3K6 86 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 PAG1Q9NWQ8 432 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 FAM198AQ9UFP1 575 aa14.46□□□□□ -0.09
LIG3-213ENST00000590630 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.09
LIG3-213ENST00000590630 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 UBE2Q2LH0YL09 131 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
LIG3-213ENST00000590630 WDHD1O75717 1129 aaPredicted RBP14.45□□□□□ -0.1
LIG3-213ENST00000590630 MAP2K2P36507 400 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 IREB2P48200 963 aaKnown RBP14.45□□□□□ -0.1
LIG3-213ENST00000590630 RGS3P49796 1198 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 PPP4CP60510 307 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 TCP10Q12799 353 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 NOGQ13253 232 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 GRM1Q13255 1194 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 PRKG1Q13976 671 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 LDLRAD1Q5T700 205 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 CERS3Q8IU89 383 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 CDAN1Q8IWY9 1227 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 MAGEB6Q8N7X4 407 aa14.45□□□□□ -0.1
LIG3-213ENST00000590630 ERC2O15083 957 aa14.44□□□□□ -0.1
LIG3-213ENST00000590630 SLC10A3P09131 477 aa14.44□□□□□ -0.1
LIG3-213ENST00000590630 CYP7A1P22680 504 aa14.44□□□□□ -0.1
LIG3-213ENST00000590630 ADGRA1Q86SQ6 560 aa14.44□□□□□ -0.1
LIG3-213ENST00000590630 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
LIG3-213ENST00000590630 LAMB1P07942 1786 aa14.44□□□□□ -0.1
LIG3-213ENST00000590630 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
LIG3-213ENST00000590630 FAM155AB1AL88 458 aaPredicted RBP14.43□□□□□ -0.1
LIG3-213ENST00000590630 USP2O75604 605 aaPredicted RBP14.43□□□□□ -0.1
LIG3-213ENST00000590630 IGHDP01880 384 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 PDE6AP16499 860 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 MX1P20591 662 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 SLC9C2Q5TAH2 1124 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 DCAF15Q66K64 600 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 TEX11Q8IYF3 940 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
LIG3-213ENST00000590630 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIG3-213ENST00000590630 FZD1Q9UP38 647 aa14.43□□□□□ -0.1
LIG3-213ENST00000590630 GLRX3O76003 335 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms