RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ECHDC1Q9NTX5 307 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 RGPD8O14715 1765 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-228ENST00000590347 ARHGAP23Q9P227 1491 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 SYF2O95926 243 aaKnown RBP17.35■□□□□ 0.37
CIRBP-228ENST00000590347 VSTM4Q8IW00 320 aa17.35■□□□□ 0.37
CIRBP-228ENST00000590347 GPHNQ9NQX3 736 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-228ENST00000590347 EBAG9O00559 213 aa17.35■□□□□ 0.37
CIRBP-228ENST00000590347 COBLO75128 1261 aa17.35■□□□□ 0.37
CIRBP-228ENST00000590347 TEFQ10587 303 aa17.35■□□□□ 0.37
CIRBP-228ENST00000590347 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-228ENST00000590347 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
CIRBP-228ENST00000590347 FOXN1O15353 648 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 HSPA2P54652 639 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
CIRBP-228ENST00000590347 NLRP12P59046 1061 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-228ENST00000590347 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 SLC35F6Q8N357 371 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 MED4Q9NPJ6 270 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 IRF6O14896 467 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 RPS6KA5O75582 802 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 CDC27P30260 824 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 GGCXP38435 758 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 PDE4BQ07343 736 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 CAPZA3Q96KX2 299 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 TFR2Q9UP52 801 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 FLT4P35916 1363 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 ENC1O14682 589 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 TC2NQ8N9U0 490 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 ACRBPQ8NEB7 543 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 FAM107BQ9H098 131 aa17.34■□□□□ 0.37
CIRBP-228ENST00000590347 SLIT1O75093 1534 aa17.33■□□□□ 0.37
CIRBP-228ENST00000590347 CPP00450 1065 aa17.33■□□□□ 0.37
CIRBP-228ENST00000590347 NSUN7Q8NE18 718 aaKnown RBP17.33■□□□□ 0.37
CIRBP-228ENST00000590347 NEK1Q96PY6 1258 aa17.33■□□□□ 0.37
CIRBP-228ENST00000590347 AOX1Q06278 1338 aa17.33■□□□□ 0.36
CIRBP-228ENST00000590347 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
CIRBP-228ENST00000590347 NEDD4P46934 1319 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 SRGAP2O75044 1071 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 PFKFB1P16118 471 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 RAD9BQ6WBX8 426 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-228ENST00000590347 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 MAP9Q49MG5 647 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 CDC23Q9UJX2 597 aa17.32■□□□□ 0.36
CIRBP-228ENST00000590347 MON2Q7Z3U7 1717 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 KCNJ6P48051 423 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 MYL5Q02045 173 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
CIRBP-228ENST00000590347 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 TUBB4AP04350 444 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 E2F5Q15329 346 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-228ENST00000590347 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
CIRBP-228ENST00000590347 ZEB2O60315 1214 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 ATP1A2P50993 1020 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 IRAK1P51617 712 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 GNGT1P63211 74 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 TRIM10Q9UDY6 481 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 GIGYF1O75420 1035 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 RPSAP08865 295 aaKnown RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 MYBL2P10244 700 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 KIF5CO60282 957 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 SF3A3Q12874 501 aaKnown RBP eCLIP17.3■□□□□ 0.362e-10■■■□□ 15.8
CIRBP-228ENST00000590347 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
CIRBP-228ENST00000590347 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
CIRBP-228ENST00000590347 TEX33O43247 280 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-228ENST00000590347 PI4KAP2A4QPH2 592 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 SPTLC2O15270 562 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 ATP2C2O75185 946 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
CIRBP-228ENST00000590347 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-228ENST00000590347 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 PI4KAP1Q8N8J0 262 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 CDHR2Q9BYE9 1310 aa17.29■□□□□ 0.36
CIRBP-228ENST00000590347 KIF1CO43896 1103 aaKnown RBP17.28■□□□□ 0.36
CIRBP-228ENST00000590347 ELF1P32519 619 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 PDCLQ13371 301 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms