RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TESPA1A2RU30 521 aaPredicted RBP9.41□□□□□ -0.9
NPC1-208ENST00000590301 FKTNO75072 461 aa9.41□□□□□ -0.9
NPC1-208ENST00000590301 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPC1-208ENST00000590301 ZKSCAN2Q63HK3 967 aa9.41□□□□□ -0.9
NPC1-208ENST00000590301 DIEXFQ68CQ4 756 aaKnown RBP9.41□□□□□ -0.9
NPC1-208ENST00000590301 SPTY2D1Q68D10 685 aaPredicted RBP9.41□□□□□ -0.9
NPC1-208ENST00000590301 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
NPC1-208ENST00000590301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPC1-208ENST00000590301 FAM151AQ8WW52 585 aa9.41□□□□□ -0.9
NPC1-208ENST00000590301 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
NPC1-208ENST00000590301 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
NPC1-208ENST00000590301 PHKA1P46020 1223 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 GTF2A2P52657 109 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 MLLT1Q03111 559 aaPredicted RBP9.4□□□□□ -0.9
NPC1-208ENST00000590301 VGLL4Q14135 290 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.4□□□□□ -0.9
NPC1-208ENST00000590301 MIER1Q8N108 512 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 ELP3Q9H9T3 547 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 FZD1Q9UP38 647 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 PA2G4Q9UQ80 394 aaKnown RBP9.4□□□□□ -0.9
NPC1-208ENST00000590301 DAGLAQ9Y4D2 1042 aa9.4□□□□□ -0.9
NPC1-208ENST00000590301 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
NPC1-208ENST00000590301 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
NPC1-208ENST00000590301 BCAR3O75815 825 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 MAP4K4O95819 1239 aaPredicted RBP9.39□□□□□ -0.91
NPC1-208ENST00000590301 PRDX5P30044 214 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 GJA5P36382 358 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 CACNB3P54284 484 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 TFCP2Q12800 502 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 FBXO46Q6PJ61 603 aaPredicted RBP9.39□□□□□ -0.91
NPC1-208ENST00000590301 ERO1BQ86YB8 467 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
NPC1-208ENST00000590301 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
NPC1-208ENST00000590301 A0A1B0GUL6 1792 aa9.39□□□□□ -0.91
NPC1-208ENST00000590301 GAKO14976 1311 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ZBED9Q6R2W3 1325 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 IGSF3O75054 1194 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ENTPD3O75355 529 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 CETPP11597 493 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ADORA1P30542 326 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 TIMM10P62072 90 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 G3BP1Q13283 466 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPC1-208ENST00000590301 MKRN4PQ13434 485 aaPredicted RBP9.38□□□□□ -0.91
NPC1-208ENST00000590301 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 CDC42EP5Q6NZY7 148 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 DZIP1Q86YF9 867 aaKnown RBP9.38□□□□□ -0.91
NPC1-208ENST00000590301 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 FTSJ3Q8IY81 847 aaKnown RBP9.38□□□□□ -0.91
NPC1-208ENST00000590301 CLUAP1Q96AJ1 413 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 XAGE2Q96GT9 111 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 IDI2Q9BXS1 227 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 ZNF341Q9BYN7 854 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 GPR108Q9NPR9 543 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 SNCAIPQ9Y6H5 919 aa9.38□□□□□ -0.91
NPC1-208ENST00000590301 CCL15-CCL14A0A0B4J2E2 113 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 GSTO1P78417 241 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 PPATQ06203 517 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 CRHR2Q13324 411 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 PPIL2Q13356 520 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 SNAPC2Q13487 334 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 CCL15Q16663 113 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 TMEM57Q8N5G2 664 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 PTPN18Q99952 460 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 ZNF112Q9UJU3 913 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
NPC1-208ENST00000590301 LDHCP07864 332 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 MS4A1P11836 297 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 ARID4AP29374 1257 aaPredicted RBP9.36□□□□□ -0.91
NPC1-208ENST00000590301 SP3Q02447 781 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
NPC1-208ENST00000590301 SPATA5Q8NB90 893 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 SSH3Q8TE77 659 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 NEUROD6Q96NK8 337 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 R3HDMLQ9H3Y0 253 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 ZFYVE28Q9HCC9 887 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 ABCF2Q9UG63 623 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 ARAP2Q8WZ64 1704 aa9.36□□□□□ -0.91
NPC1-208ENST00000590301 MROH7-TTC4A0A0A0MT08 1334 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 PNMA6EA0A0J9YXQ4 647 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 ATP8B2P98198 1209 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 MECOMQ03112 1051 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 TCP10Q12799 353 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 NFIAQ12857 509 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms