RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 SUPT20HL1Q3ZLR7 823 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 CDC42EP5Q6NZY7 148 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 CDAN1Q8IWY9 1227 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 SLF2Q8IX21 1173 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 USP40Q9NVE5 1235 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
SCAMP4-212ENST00000590266 ZBTB22O15209 634 aa17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 MAP2K2P36507 400 aa17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 BTDP43251 543 aa17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 TCP10Q12799 353 aa17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
SCAMP4-212ENST00000590266 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-212ENST00000590266 HSPA8P11142 646 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-212ENST00000590266 GSTO1P78417 241 aa17.15■□□□□ 0.34
SCAMP4-212ENST00000590266 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-212ENST00000590266 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
SCAMP4-212ENST00000590266 TRPM7Q96QT4 1865 aa17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 NFIAQ12857 509 aa17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 NSUN4Q96CB9 384 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 PIH1D3Q9NQM4 214 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-212ENST00000590266 PAPPA2Q9BXP8 1791 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 LDHCP07864 332 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 SLC10A3P09131 477 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 NOGQ13253 232 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 PICALMQ13492 652 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 RASAL3Q86YV0 1011 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 TEPSINQ96N21 525 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 ZIC5Q96T25 663 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 GAKO14976 1311 aa17.13■□□□□ 0.33
SCAMP4-212ENST00000590266 MYH13Q9UKX3 1938 aa17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
SCAMP4-212ENST00000590266 CA12O43570 354 aa17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 IREB2P48200 963 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 FKBP1CQ5VVH2 108 aa17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 CLMNQ96JQ2 1002 aa17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 FAM198AQ9UFP1 575 aa17.11■□□□□ 0.33
SCAMP4-212ENST00000590266 GPR75-ASB3A0A0A6YYF3 556 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 USP2O75604 605 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 RGS3P49796 1198 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 MIGA2Q7L4E1 593 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 FAM151AQ8WW52 585 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 BOLA2Q9H3K6 86 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
SCAMP4-212ENST00000590266 GOLIM4O00461 696 aa17.09■□□□□ 0.33
SCAMP4-212ENST00000590266 CYP7A1P22680 504 aa17.09■□□□□ 0.33
SCAMP4-212ENST00000590266 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
SCAMP4-212ENST00000590266 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-212ENST00000590266 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-212ENST00000590266 MAP3K12Q12852 859 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 TSHZ3Q63HK5 1081 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 TEX11Q8IYF3 940 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 ANKRD13AQ8IZ07 590 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 MAGEB6Q8N7X4 407 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 ELP3Q9H9T3 547 aa17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-212ENST00000590266 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 BAG3O95817 575 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 RHBDL3P58872 404 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 TTF1Q15361 905 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 DCAF15Q66K64 600 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 ECM29Q5VYK3 1845 aa17.07■□□□□ 0.32
SCAMP4-212ENST00000590266 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-212ENST00000590266 ENTPD3O75355 529 aa17.06■□□□□ 0.32
SCAMP4-212ENST00000590266 ATP5JP18859 108 aa17.06■□□□□ 0.32
SCAMP4-212ENST00000590266 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-212ENST00000590266 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
SCAMP4-212ENST00000590266 CSADQ9Y600 493 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms