RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 RAI14Q9P0K7 980 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 ARID4AP29374 1257 aaPredicted RBP14.83□□□□□ -0.04
TPM4-212ENST00000590180 FKBP1CQ5VVH2 108 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 PI16Q6UXB8 463 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
TPM4-212ENST00000590180 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
TPM4-212ENST00000590180 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 LRP2BPQ9P2M1 347 aa14.83□□□□□ -0.04
TPM4-212ENST00000590180 PDS5AQ29RF7 1337 aaKnown RBP14.83□□□□□ -0.04
TPM4-212ENST00000590180 TRPA1O75762 1119 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 MCAMP43121 646 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 TCP10Q12799 353 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 CLMNQ96JQ2 1002 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
TPM4-212ENST00000590180 LDHCP07864 332 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 MECOMQ03112 1051 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 AACSQ86V21 672 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 SIRT2Q8IXJ6 389 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 RHPN1Q8TCX5 695 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 FAM151AQ8WW52 585 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 IL1RAPL2Q9NP60 686 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 RNF186Q9NXI6 227 aa14.81□□□□□ -0.04
TPM4-212ENST00000590180 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
TPM4-212ENST00000590180 UNCXA6NJT0 531 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 GSTO1P78417 241 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 MAP3K9P80192 1104 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 NFIAQ12857 509 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 SPRYD7Q5W111 196 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
TPM4-212ENST00000590180 FAM163AQ96GL9 167 aaPredicted RBP14.8□□□□□ -0.04
TPM4-212ENST00000590180 BTDP43251 543 aa14.79□□□□□ -0.04
TPM4-212ENST00000590180 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
TPM4-212ENST00000590180 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
TPM4-212ENST00000590180 KIF1BPQ96EK5 621 aa14.79□□□□□ -0.04
TPM4-212ENST00000590180 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
TPM4-212ENST00000590180 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
TPM4-212ENST00000590180 MYH13Q9UKX3 1938 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 MROH7-TTC4A0A0A0MT08 1334 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 GAKO14976 1311 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 GPR75-ASB3A0A0A6YYF3 556 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 ZAP70P43403 619 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 TM4SF4P48230 202 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 IFFO2Q5TF58 517 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 DCAF15Q66K64 600 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
TPM4-212ENST00000590180 NSUN4Q96CB9 384 aaKnown RBP14.78□□□□□ -0.04
TPM4-212ENST00000590180 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
TPM4-212ENST00000590180 FAM198AQ9UFP1 575 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 CSADQ9Y600 493 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 ECM29Q5VYK3 1845 aa14.78□□□□□ -0.04
TPM4-212ENST00000590180 SSC5DA1L4H1 1573 aa14.77□□□□□ -0.04
TPM4-212ENST00000590180 CYP2E1P05181 493 aaPredicted RBP14.77□□□□□ -0.05
TPM4-212ENST00000590180 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
TPM4-212ENST00000590180 RGS3P49796 1198 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 SREBF2Q12772 1141 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 PICALMQ13492 652 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 NAA16Q6N069 864 aaPredicted RBP14.77□□□□□ -0.05
TPM4-212ENST00000590180 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
TPM4-212ENST00000590180 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 NOL10Q9BSC4 688 aaKnown RBP14.77□□□□□ -0.05
TPM4-212ENST00000590180 SAGE1Q9NXZ1 904 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 ARAP2Q8WZ64 1704 aa14.77□□□□□ -0.05
TPM4-212ENST00000590180 MANSC4A6NHS7 340 aaPredicted RBP14.76□□□□□ -0.05
TPM4-212ENST00000590180 ENTPD3O75355 529 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 ZBTB48P10074 688 aaPredicted RBP14.76□□□□□ -0.05
TPM4-212ENST00000590180 INHBEP58166 350 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
TPM4-212ENST00000590180 ZNF384Q8TF68 577 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 WRNIP1Q96S55 665 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 IDI2Q9BXS1 227 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 ZNF341Q9BYN7 854 aa14.76□□□□□ -0.05
TPM4-212ENST00000590180 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
TPM4-212ENST00000590180 BAG3O95817 575 aa14.75□□□□□ -0.05
TPM4-212ENST00000590180 RRP1P56182 461 aaKnown RBP14.75□□□□□ -0.05
TPM4-212ENST00000590180 VGLL4Q14135 290 aa14.75□□□□□ -0.05
TPM4-212ENST00000590180 ZKSCAN4Q969J2 545 aaPredicted RBP14.75□□□□□ -0.05
TPM4-212ENST00000590180 OPTNQ96CV9 577 aa14.75□□□□□ -0.05
TPM4-212ENST00000590180 PIH1D3Q9NQM4 214 aaKnown RBP14.75□□□□□ -0.05
TPM4-212ENST00000590180 NDUFB9Q9Y6M9 179 aa14.75□□□□□ -0.05
TPM4-212ENST00000590180 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
TPM4-212ENST00000590180 CAPN15O75808 1086 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
TPM4-212ENST00000590180 GJA5P36382 358 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 RHBDL3P58872 404 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 TEX11Q8IYF3 940 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
TPM4-212ENST00000590180 AK9Q5TCS8 1911 aa14.73□□□□□ -0.05
TPM4-212ENST00000590180 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
TPM4-212ENST00000590180 CYP7A1P22680 504 aa14.73□□□□□ -0.05
TPM4-212ENST00000590180 OTUD7BQ6GQQ9 843 aa14.73□□□□□ -0.05
TPM4-212ENST00000590180 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms