RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 PI16Q6UXB8 463 aa25.38■■□□□ 1.65
CIRBP-226ENST00000590171 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-226ENST00000590171 ABHD8Q96I13 439 aa25.38■■□□□ 1.65
CIRBP-226ENST00000590171 RCAN3Q9UKA8 241 aa25.38■■□□□ 1.65
CIRBP-226ENST00000590171 NOP58Q9Y2X3 529 aaKnown RBP25.38■■□□□ 1.65
CIRBP-226ENST00000590171 FPGT-TNNI3KV9GXZ4 949 aa25.38■■□□□ 1.65
CIRBP-226ENST00000590171 GAKO14976 1311 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 CASP8AP2Q9UKL3 1982 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 MANSC4A6NHS7 340 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-226ENST00000590171 MS4A1P11836 297 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 NFIAQ12857 509 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 DZIP1Q86YF9 867 aaKnown RBP25.37■■□□□ 1.65
CIRBP-226ENST00000590171 SPATA5Q8NB90 893 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.37■■□□□ 1.657e-15■□□□□ 9.7
CIRBP-226ENST00000590171 ELP3Q9H9T3 547 aa25.37■■□□□ 1.65
CIRBP-226ENST00000590171 TBC1D8O95759 1140 aa25.36■■□□□ 1.65
CIRBP-226ENST00000590171 FAM151AQ8WW52 585 aa25.36■■□□□ 1.65
CIRBP-226ENST00000590171 USP40Q9NVE5 1235 aa25.36■■□□□ 1.65
CIRBP-226ENST00000590171 MCAMP43121 646 aa25.35■■□□□ 1.65
CIRBP-226ENST00000590171 MAP3K9P80192 1104 aa25.35■■□□□ 1.65
CIRBP-226ENST00000590171 VGLL4Q14135 290 aa25.35■■□□□ 1.65
CIRBP-226ENST00000590171 SPTY2D1Q68D10 685 aaPredicted RBP25.35■■□□□ 1.65
CIRBP-226ENST00000590171 DBNDD2Q9BQY9 259 aa25.35■■□□□ 1.65
CIRBP-226ENST00000590171 MCOLN1Q9GZU1 580 aa25.35■■□□□ 1.65
CIRBP-226ENST00000590171 TCP10Q12799 353 aa25.34■■□□□ 1.65
CIRBP-226ENST00000590171 ZNF384Q8TF68 577 aa25.34■■□□□ 1.65
CIRBP-226ENST00000590171 OPTNQ96CV9 577 aa25.34■■□□□ 1.65
CIRBP-226ENST00000590171 FAM198AQ9UFP1 575 aa25.34■■□□□ 1.65
CIRBP-226ENST00000590171 COG6Q9Y2V7 657 aa25.34■■□□□ 1.65
CIRBP-226ENST00000590171 LAMB1P07942 1786 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 UQCRFS1P1P0C7P4 283 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 INHBEP58166 350 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 MECOMQ03112 1051 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 DGKZQ13574 1117 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 TBC1D9Q6ZT07 1266 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 CNKSR2Q8WXI2 1034 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 HOOK2Q96ED9 719 aa25.33■■□□□ 1.65
CIRBP-226ENST00000590171 FAM163AQ96GL9 167 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-226ENST00000590171 RFX7Q2KHR2 1363 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 IFNL1Q8IU54 200 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 SLF2Q8IX21 1173 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 WRNIP1Q96S55 665 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 CFHR5Q9BXR6 569 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 CSADQ9Y600 493 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 MROH7-TTC4A0A0A0MT08 1334 aa25.32■■□□□ 1.64
CIRBP-226ENST00000590171 IGF2BP3O00425 579 aaKnown RBP eCLIP25.31■■□□□ 1.64
CIRBP-226ENST00000590171 BTDP43251 543 aa25.31■■□□□ 1.64
CIRBP-226ENST00000590171 TTC39AQ5SRH9 613 aa25.31■■□□□ 1.64
CIRBP-226ENST00000590171 DCAF15Q66K64 600 aa25.31■■□□□ 1.64
CIRBP-226ENST00000590171 DDX19BQ9UMR2 479 aa25.31■■□□□ 1.64
CIRBP-226ENST00000590171 SNCAIPQ9Y6H5 919 aa25.31■■□□□ 1.64
CIRBP-226ENST00000590171 MYH2Q9UKX2 1941 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 ALDH1A1P00352 501 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 CCDC158Q5M9N0 1113 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 MIGA2Q7L4E1 593 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 ZNF296Q8WUU4 475 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-226ENST00000590171 NSUN4Q96CB9 384 aaKnown RBP25.3■■□□□ 1.64
CIRBP-226ENST00000590171 IDI2Q9BXS1 227 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 R3HDMLQ9H3Y0 253 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 TLR7Q9NYK1 1049 aaKnown RBP25.3■■□□□ 1.64
CIRBP-226ENST00000590171 DBNLQ9UJU6 430 aaKnown RBP25.3■■□□□ 1.64
CIRBP-226ENST00000590171 EXOC6BQ9Y2D4 811 aa25.3■■□□□ 1.64
CIRBP-226ENST00000590171 RGS3P49796 1198 aa25.29■■□□□ 1.64
CIRBP-226ENST00000590171 ZKSCAN4Q969J2 545 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-226ENST00000590171 EAF2Q96CJ1 260 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-226ENST00000590171 ZNF341Q9BYN7 854 aa25.29■■□□□ 1.64
CIRBP-226ENST00000590171 SNRKQ9NRH2 765 aa25.29■■□□□ 1.64
CIRBP-226ENST00000590171 GPR75-ASB3A0A0A6YYF3 556 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 TESPA1A2RU30 521 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-226ENST00000590171 SPDYE5A6NIY4 337 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 GPR25O00155 361 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 NOM1Q5C9Z4 860 aaKnown RBP25.28■■□□□ 1.64
CIRBP-226ENST00000590171 OTUD5Q96G74 571 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 MS4A4AQ96JQ5 239 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 CCDC8Q9H0W5 538 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-226ENST00000590171 ZBTB40Q9NUA8 1239 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 RAI14Q9P0K7 980 aa25.28■■□□□ 1.64
CIRBP-226ENST00000590171 ENTPD3O75355 529 aa25.27■■□□□ 1.64
CIRBP-226ENST00000590171 WDHD1O75717 1129 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-226ENST00000590171 ZNF512BQ96KM6 892 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-226ENST00000590171 PTPN18Q99952 460 aa25.27■■□□□ 1.64
CIRBP-226ENST00000590171 INPP5BP32019 993 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 RHBDL3P58872 404 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 GSTO1P78417 241 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 CTU1Q7Z7A3 348 aaKnown RBP25.26■■□□□ 1.63
CIRBP-226ENST00000590171 DDX4Q9NQI0 724 aaKnown RBP25.26■■□□□ 1.63
CIRBP-226ENST00000590171 LRP2BPQ9P2M1 347 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 ATRNL1Q5VV63 1379 aa25.26■■□□□ 1.63
CIRBP-226ENST00000590171 PICALMQ13492 652 aa25.25■■□□□ 1.63
CIRBP-226ENST00000590171 SH3BP5LQ7L8J4 393 aa25.25■■□□□ 1.63
CIRBP-226ENST00000590171 ERO1BQ86YB8 467 aa25.25■■□□□ 1.63
CIRBP-226ENST00000590171 ERC1Q8IUD2 1116 aa25.25■■□□□ 1.63
CIRBP-226ENST00000590171 RPAP2Q8IXW5 612 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-226ENST00000590171 ZNF112Q9UJU3 913 aa25.25■■□□□ 1.63
CIRBP-226ENST00000590171 CYP2E1P05181 493 aaPredicted RBP25.24■■□□□ 1.63
CIRBP-226ENST00000590171 LDHCP07864 332 aa25.24■■□□□ 1.63
CIRBP-226ENST00000590171 SIRT2Q8IXJ6 389 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms