RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 CCDC40Q4G0X9 1142 aa13.41□□□□□ -0.26
TREM1-206ENST00000589882 MYO1AQ9UBC5 1043 aa13.41□□□□□ -0.26
TREM1-206ENST00000589882 CCDC9Q9Y3X0 531 aaKnown RBP13.41□□□□□ -0.26
TREM1-206ENST00000589882 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 PPLO60437 1756 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 GCKP35557 465 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 KRT32Q14532 448 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 PDCD2Q16342 344 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 CCDC26Q8TAB7 109 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 NAPGQ99747 312 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 ABCC1P33527 1531 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 SLC27A2O14975 620 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 DTNBO60941 627 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 RASSF9O75901 435 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 ACTN3Q08043 901 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 IFFO1Q0D2I5 559 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
TREM1-206ENST00000589882 MAB21L3Q8N8X9 362 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 PANX2Q96RD6 677 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
TREM1-206ENST00000589882 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 OPA1O60313 960 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
TREM1-206ENST00000589882 PRPHP41219 470 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 SKOR1P84550 965 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 SPECC1LQ69YQ0 1117 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 PDILTQ8N807 584 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 TCP11Q8WWU5 503 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 RSRC1Q96IZ7 334 aaKnown RBP13.39□□□□□ -0.27
TREM1-206ENST00000589882 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
TREM1-206ENST00000589882 GOLGA6BA6NDN3 693 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 NBPF7P0C2Y1 421 aaPredicted RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 ATP1A3P13637 1013 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 IL13P35225 146 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 GGCXP38435 758 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 MTX1Q13505 466 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 FBXO41Q8TF61 875 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 RTEL1Q9NZ71 1219 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 GBP2P32456 591 aaPredicted RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 USP14P54578 494 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 ZNF569Q5MCW4 686 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 TAX1BP1Q86VP1 789 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 DPF2Q92785 391 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 SH3GL2Q99962 352 aa13.38□□□□□ -0.27
TREM1-206ENST00000589882 MRPL44Q9H9J2 332 aaKnown RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
TREM1-206ENST00000589882 ZC3H4Q9UPT8 1303 aaKnown RBP13.37□□□□□ -0.27
TREM1-206ENST00000589882 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
TREM1-206ENST00000589882 JAK2O60674 1132 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 MYBL2P10244 700 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 NDUFA8P51970 172 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 RUBCNQ92622 972 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
TREM1-206ENST00000589882 STK3Q13188 491 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 SLMAPQ14BN4 828 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
TREM1-206ENST00000589882 ZC3H12AQ5D1E8 599 aaKnown RBP13.36□□□□□ -0.27
TREM1-206ENST00000589882 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 SLC40A1Q9NP59 571 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
TREM1-206ENST00000589882 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
TREM1-206ENST00000589882 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
TREM1-206ENST00000589882 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
TREM1-206ENST00000589882 F6X3S4 739 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms