RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 SNAPC2Q13487 334 aa20.25■□□□□ 0.83
RAB3D-202ENST00000589655 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
RAB3D-202ENST00000589655 WDR66Q8TBY9 1149 aa20.25■□□□□ 0.83
RAB3D-202ENST00000589655 ZCCHC17Q9NP64 241 aaKnown RBP20.25■□□□□ 0.83
RAB3D-202ENST00000589655 CTGFP29279 349 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 PRDX5P30044 214 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
RAB3D-202ENST00000589655 NFIAQ12857 509 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 SLC9C1Q4G0N8 1177 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 DCAF15Q66K64 600 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 CDC42EP5Q6NZY7 148 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 FAM151AQ8WW52 585 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 ZNF341Q9BYN7 854 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 ZNF112Q9UJU3 913 aa20.24■□□□□ 0.83
RAB3D-202ENST00000589655 PPATQ06203 517 aa20.23■□□□□ 0.83
RAB3D-202ENST00000589655 HABP4Q5JVS0 413 aaKnown RBP20.23■□□□□ 0.83
RAB3D-202ENST00000589655 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
RAB3D-202ENST00000589655 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
RAB3D-202ENST00000589655 FAM198AQ9UFP1 575 aa20.23■□□□□ 0.83
RAB3D-202ENST00000589655 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
RAB3D-202ENST00000589655 TCP10Q12799 353 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 MOGSQ13724 837 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 ARHGEF6Q15052 776 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 C17orf99Q6UX52 265 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 SH3TC2Q8TF17 1288 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 TMEM106CQ9BVX2 250 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 SIL1Q9H173 461 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 ADGRA2Q96PE1 1338 aa20.22■□□□□ 0.83
RAB3D-202ENST00000589655 MYCP01106 439 aaPredicted RBP20.21■□□□□ 0.83
RAB3D-202ENST00000589655 ZFPM1Q8IX07 1006 aa20.21■□□□□ 0.83
RAB3D-202ENST00000589655 KCNH4Q9UQ05 1017 aa20.21■□□□□ 0.83
RAB3D-202ENST00000589655 CIAO1O76071 339 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 PHKA1P46020 1223 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 TRMT2AQ8IZ69 625 aaKnown RBP20.2■□□□□ 0.82
RAB3D-202ENST00000589655 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
RAB3D-202ENST00000589655 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
RAB3D-202ENST00000589655 NOL9Q5SY16 702 aaKnown RBP20.19■□□□□ 0.82
RAB3D-202ENST00000589655 ANKRD23Q86SG2 305 aa20.19■□□□□ 0.82
RAB3D-202ENST00000589655 CPA4Q9UI42 421 aa20.19■□□□□ 0.82
RAB3D-202ENST00000589655 FBXO3Q9UK99 471 aa20.19■□□□□ 0.82
RAB3D-202ENST00000589655 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
RAB3D-202ENST00000589655 SALL1Q9NSC2 1324 aa20.19■□□□□ 0.82
RAB3D-202ENST00000589655 AK9Q5TCS8 1911 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 PDHXO00330 501 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 WDHD1O75717 1129 aaPredicted RBP20.18■□□□□ 0.82
RAB3D-202ENST00000589655 LDHBP07195 334 aaKnown RBP20.18■□□□□ 0.82
RAB3D-202ENST00000589655 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
RAB3D-202ENST00000589655 ADORA1P30542 326 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 KIF22Q14807 665 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 USP40Q9NVE5 1235 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 CEP126Q9P2H0 1117 aa20.18■□□□□ 0.82
RAB3D-202ENST00000589655 GNRH1P01148 92 aa20.17■□□□□ 0.82
RAB3D-202ENST00000589655 LRRFIP2Q9Y608 721 aaKnown RBP20.17■□□□□ 0.82
RAB3D-202ENST00000589655 RFX7Q2KHR2 1363 aa20.17■□□□□ 0.82
RAB3D-202ENST00000589655 PHF20L1A8MW92 1017 aa20.16■□□□□ 0.82
RAB3D-202ENST00000589655 PSMC4P43686 418 aa20.16■□□□□ 0.82
RAB3D-202ENST00000589655 GPAT2Q6NUI2 795 aa20.16■□□□□ 0.82
RAB3D-202ENST00000589655 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
RAB3D-202ENST00000589655 MYH2Q9UKX2 1941 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 CEP290O15078 2479 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 SEMA3EO15041 775 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 ZBTB22O15209 634 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 SLURP2P0DP57 97 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 PRMT2P55345 433 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 MTFR1Q15390 333 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 SH3BP5LQ7L8J4 393 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 SHISA4Q96DD7 197 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 GNL3LQ9NVN8 582 aaKnown RBP20.15■□□□□ 0.82
RAB3D-202ENST00000589655 SRRDQ9UH36 339 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 DENND2AQ9ULE3 1009 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 GAKO14976 1311 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 DOCK2Q92608 1830 aa20.15■□□□□ 0.82
RAB3D-202ENST00000589655 OSBPP22059 807 aa20.14■□□□□ 0.81
RAB3D-202ENST00000589655 IL15P40933 162 aaPredicted RBP20.14■□□□□ 0.81
RAB3D-202ENST00000589655 RGS3P49796 1198 aa20.14■□□□□ 0.81
RAB3D-202ENST00000589655 CCDC102BQ68D86 513 aa20.14■□□□□ 0.81
RAB3D-202ENST00000589655 MEIS3Q99687 375 aa20.14■□□□□ 0.81
RAB3D-202ENST00000589655 IDI2Q9BXS1 227 aa20.14■□□□□ 0.81
RAB3D-202ENST00000589655 BCRP11274 1271 aa20.13■□□□□ 0.81
RAB3D-202ENST00000589655 RASGRF1Q13972 1273 aa20.13■□□□□ 0.81
RAB3D-202ENST00000589655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
RAB3D-202ENST00000589655 CXCL11O14625 94 aa20.12■□□□□ 0.81
RAB3D-202ENST00000589655 ENTPD3O75355 529 aa20.12■□□□□ 0.81
RAB3D-202ENST00000589655 CYP2C8P10632 490 aa20.12■□□□□ 0.81
RAB3D-202ENST00000589655 FXR1P51114 621 aaKnown RBP eCLIP20.12■□□□□ 0.81
RAB3D-202ENST00000589655 TIMM10P62072 90 aa20.12■□□□□ 0.81
RAB3D-202ENST00000589655 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
RAB3D-202ENST00000589655 DDX4Q9NQI0 724 aaKnown RBP20.12■□□□□ 0.81
RAB3D-202ENST00000589655 COLQQ9Y215 455 aaPredicted RBP20.12■□□□□ 0.81
RAB3D-202ENST00000589655 DDTLA6NHG4 134 aaPredicted RBP20.11■□□□□ 0.81
RAB3D-202ENST00000589655 SCYL3Q8IZE3 742 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms