RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 SSC5DA1L4H1 1573 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 THSD7BQ9C0I4 1608 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 LDHCP07864 332 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 SLC10A3P09131 477 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 ZNF157P51786 506 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-207ENST00000589417 GSTO1P78417 241 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 TMED8Q6PL24 325 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-207ENST00000589417 PAXIP1Q6ZW49 1069 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-207ENST00000589417 MOB2Q70IA6 237 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 CRBNQ96SW2 442 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 IDI2Q9BXS1 227 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 MROH7-TTC4A0A0A0MT08 1334 aa21.49■■□□□ 1.03
H3F3B-207ENST00000589417 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
H3F3B-207ENST00000589417 UBE2Q2LH0YL09 131 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 ZAP70P43403 619 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 FAM151AQ8WW52 585 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 TMEM39BQ9GZU3 492 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 SNRKQ9NRH2 765 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 USP40Q9NVE5 1235 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 LRP2BPQ9P2M1 347 aa21.48■■□□□ 1.03
H3F3B-207ENST00000589417 USP2O75604 605 aaPredicted RBP21.47■■□□□ 1.03
H3F3B-207ENST00000589417 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
H3F3B-207ENST00000589417 HSPA1AP0DMV8 641 aaKnown RBP21.47■■□□□ 1.03
H3F3B-207ENST00000589417 HSPA1BP0DMV9 641 aaKnown RBP21.47■■□□□ 1.03
H3F3B-207ENST00000589417 CACNB3P54284 484 aa21.47■■□□□ 1.03
H3F3B-207ENST00000589417 AOC2O75106 756 aa21.46■■□□□ 1.03
H3F3B-207ENST00000589417 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
H3F3B-207ENST00000589417 TTLL12Q14166 644 aaPredicted RBP21.46■■□□□ 1.03
H3F3B-207ENST00000589417 RASAL3Q86YV0 1011 aa21.46■■□□□ 1.03
H3F3B-207ENST00000589417 RAI14Q9P0K7 980 aa21.46■■□□□ 1.03
H3F3B-207ENST00000589417 ANGEL1Q9UNK9 670 aaKnown RBP21.46■■□□□ 1.03
H3F3B-207ENST00000589417 APBB1O00213 710 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 ENTPD3O75355 529 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 RHBDL3P58872 404 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 NFIAQ12857 509 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 CDAN1Q8IWY9 1227 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 REM2Q8IYK8 340 aaPredicted RBP21.45■■□□□ 1.02
H3F3B-207ENST00000589417 HOOK2Q96ED9 719 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 PIH1D3Q9NQM4 214 aaKnown RBP21.45■■□□□ 1.02
H3F3B-207ENST00000589417 FAM198AQ9UFP1 575 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 RFX7Q2KHR2 1363 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 AKAP11Q9UKA4 1901 aa21.45■■□□□ 1.02
H3F3B-207ENST00000589417 BTDP43251 543 aa21.44■■□□□ 1.02
H3F3B-207ENST00000589417 IREB2P48200 963 aaKnown RBP21.44■■□□□ 1.02
H3F3B-207ENST00000589417 PPP4CP60510 307 aa21.44■■□□□ 1.02
H3F3B-207ENST00000589417 WDHD1O75717 1129 aaPredicted RBP21.43■■□□□ 1.02
H3F3B-207ENST00000589417 ATP5JP18859 108 aa21.43■■□□□ 1.02
H3F3B-207ENST00000589417 GRM1Q13255 1194 aa21.43■■□□□ 1.02
H3F3B-207ENST00000589417 HDAC1Q13547 482 aaPredicted RBP21.43■■□□□ 1.02
H3F3B-207ENST00000589417 ZIC5Q96T25 663 aa21.43■■□□□ 1.02
H3F3B-207ENST00000589417 KIF23Q02241 960 aaPredicted RBP21.42■■□□□ 1.02
H3F3B-207ENST00000589417 PRKG1Q13976 671 aa21.42■■□□□ 1.02
H3F3B-207ENST00000589417 TTF1Q15361 905 aaPredicted RBP21.42■■□□□ 1.02
H3F3B-207ENST00000589417 NAA16Q6N069 864 aaPredicted RBP21.42■■□□□ 1.02
H3F3B-207ENST00000589417 ANKRD13AQ8IZ07 590 aa21.42■■□□□ 1.02
H3F3B-207ENST00000589417 CA12O43570 354 aa21.41■■□□□ 1.02
H3F3B-207ENST00000589417 FZD1Q9UP38 647 aa21.41■■□□□ 1.02
H3F3B-207ENST00000589417 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
H3F3B-207ENST00000589417 BAG3O95817 575 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 RGS3P49796 1198 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 MAP3K9P80192 1104 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.4■■□□□ 1.022e-9■□□□□ 8
H3F3B-207ENST00000589417 AIDAQ96BJ3 306 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 SLC10A4Q96EP9 437 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 ANTXR1Q9H6X2 564 aa21.4■■□□□ 1.02
H3F3B-207ENST00000589417 FOXN1O15353 648 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 PLCG2P16885 1265 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 TCP10Q12799 353 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 MAP3K12Q12852 859 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 SPRYD7Q5W111 196 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 DCAF15Q66K64 600 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.39■■□□□ 1.01
H3F3B-207ENST00000589417 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 ZFPM1Q8IX07 1006 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 DDX4Q9NQI0 724 aaKnown RBP21.39■■□□□ 1.01
H3F3B-207ENST00000589417 ZNF112Q9UJU3 913 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 MYH2Q9UKX2 1941 aa21.39■■□□□ 1.01
H3F3B-207ENST00000589417 SMARCA5O60264 1052 aaPredicted RBP21.38■■□□□ 1.01
H3F3B-207ENST00000589417 ZBTB48P10074 688 aaPredicted RBP21.38■■□□□ 1.01
H3F3B-207ENST00000589417 TM4SF4P48230 202 aa21.38■■□□□ 1.01
H3F3B-207ENST00000589417 CTCFP49711 727 aaPredicted RBP21.38■■□□□ 1.01
H3F3B-207ENST00000589417 ADGRA1Q86SQ6 560 aa21.38■■□□□ 1.01
H3F3B-207ENST00000589417 HAUS7Q99871 368 aa21.38■■□□□ 1.01
H3F3B-207ENST00000589417 BEGAINQ9BUH8 593 aa21.38■■□□□ 1.01
H3F3B-207ENST00000589417 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
H3F3B-207ENST00000589417 ATRNL1Q5VV63 1379 aa21.37■■□□□ 1.01
H3F3B-207ENST00000589417 IDH1O75874 414 aaKnown RBP21.37■■□□□ 1.01
H3F3B-207ENST00000589417 SH3BP5LQ7L8J4 393 aa21.37■■□□□ 1.01
H3F3B-207ENST00000589417 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
H3F3B-207ENST00000589417 CLMNQ96JQ2 1002 aa21.37■■□□□ 1.01
H3F3B-207ENST00000589417 ECHDC1Q9NTX5 307 aa21.37■■□□□ 1.01
H3F3B-207ENST00000589417 COL2A1P02458 1487 aaPredicted RBP21.37■■□□□ 1.01
H3F3B-207ENST00000589417 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
H3F3B-207ENST00000589417 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
H3F3B-207ENST00000589417 PRDM10Q9NQV6 1147 aa21.36■■□□□ 1.01
H3F3B-207ENST00000589417 SAGE1Q9NXZ1 904 aa21.36■■□□□ 1.01
H3F3B-207ENST00000589417 TBC1D12O60347 775 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms