RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 ARID4AP29374 1257 aaPredicted RBP11.83□□□□□ -0.52
APOC1-204ENST00000589078 FXR1P51114 621 aaKnown RBP eCLIP11.83□□□□□ -0.52
APOC1-204ENST00000589078 NBPF9Q3BBW0 867 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
APOC1-204ENST00000589078 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 SPATA5Q8NB90 893 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 MRIQ9BWK5 157 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
APOC1-204ENST00000589078 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
APOC1-204ENST00000589078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
APOC1-204ENST00000589078 NF2P35240 595 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 CRKP46108 304 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 ZBED3Q96IU2 234 aaPredicted RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 ZNF512BQ96KM6 892 aaPredicted RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 IL1RAPL2Q9NP60 686 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 ABCF2Q9UG63 623 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 DBNLQ9UJU6 430 aaKnown RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
APOC1-204ENST00000589078 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
APOC1-204ENST00000589078 CEP290O15078 2479 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 IGSF3O75054 1194 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 PRKG1Q13976 671 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 ZDHHC15Q96MV8 337 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
APOC1-204ENST00000589078 PRDX5P30044 214 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 GSTO1P78417 241 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 SPRYD7Q5W111 196 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 HHIPL2Q6UWX4 724 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 PRMT6Q96LA8 375 aaPredicted RBP11.8□□□□□ -0.52
APOC1-204ENST00000589078 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
APOC1-204ENST00000589078 LRP2BPQ9P2M1 347 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
APOC1-204ENST00000589078 COL1A1P02452 1464 aaPredicted RBP11.8□□□□□ -0.52
APOC1-204ENST00000589078 KIAA0100Q14667 2235 aaKnown RBP11.8□□□□□ -0.52
APOC1-204ENST00000589078 CLRN2A0PK11 232 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 LDHCP07864 332 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 MCAMP43121 646 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 TNNI2P48788 182 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
APOC1-204ENST00000589078 GRIK5Q16478 980 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 ARMC9Q7Z3E5 817 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
APOC1-204ENST00000589078 RAI14Q9P0K7 980 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
APOC1-204ENST00000589078 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
APOC1-204ENST00000589078 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOC1-204ENST00000589078 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
APOC1-204ENST00000589078 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
APOC1-204ENST00000589078 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
APOC1-204ENST00000589078 ANGEL1Q9UNK9 670 aaKnown RBP11.78□□□□□ -0.52
APOC1-204ENST00000589078 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 TRIOBPQ9H2D6 2365 aa11.78□□□□□ -0.52
APOC1-204ENST00000589078 ARAP2Q8WZ64 1704 aa11.77□□□□□ -0.52
APOC1-204ENST00000589078 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
APOC1-204ENST00000589078 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
APOC1-204ENST00000589078 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 SUPT20HL1Q3ZLR7 823 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 FKBP1CQ5VVH2 108 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.53
APOC1-204ENST00000589078 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
APOC1-204ENST00000589078 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
APOC1-204ENST00000589078 ERO1AQ96HE7 468 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
APOC1-204ENST00000589078 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 OTOFQ9HC10 1997 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
APOC1-204ENST00000589078 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
APOC1-204ENST00000589078 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
APOC1-204ENST00000589078 ZAP70P43403 619 aa11.76□□□□□ -0.53
APOC1-204ENST00000589078 MECOMQ03112 1051 aa11.76□□□□□ -0.53
APOC1-204ENST00000589078 MAP3K12Q12852 859 aa11.76□□□□□ -0.53
APOC1-204ENST00000589078 RASA3Q14644 834 aa11.76□□□□□ -0.53
APOC1-204ENST00000589078 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
APOC1-204ENST00000589078 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms