RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 HHIPL2Q6UWX4 724 aa17.32■□□□□ 0.36
NPC1-207ENST00000588867 CRNKL1Q9BZJ0 848 aaKnown RBP17.32■□□□□ 0.36
NPC1-207ENST00000588867 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
NPC1-207ENST00000588867 GAKO14976 1311 aa17.32■□□□□ 0.36
NPC1-207ENST00000588867 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 PPP4CP60510 307 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 IFNL3Q8IZI9 196 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 AGBL3Q8NEM8 1001 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 SH3RF3Q8TEJ3 882 aaPredicted RBP17.31■□□□□ 0.36
NPC1-207ENST00000588867 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 RNF20Q5VTR2 975 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 GMLQ99445 158 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 MRIQ9BWK5 157 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
NPC1-207ENST00000588867 SLC27A2O14975 620 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 USP17L8P0C7I0 530 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
NPC1-207ENST00000588867 TDO2P48775 406 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
NPC1-207ENST00000588867 NAPBQ9H115 298 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 SERPINA10Q9UK55 444 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 PCDHAC2Q9Y5I4 1007 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 DICER1Q9UPY3 1922 aaKnown RBP17.3■□□□□ 0.36
NPC1-207ENST00000588867 ZNF541Q9H0D2 1346 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 PLCG2P16885 1265 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 USP5P45974 858 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 CERS3Q8IU89 383 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 RASEFQ8IZ41 740 aa17.3■□□□□ 0.36
NPC1-207ENST00000588867 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
NPC1-207ENST00000588867 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
NPC1-207ENST00000588867 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
NPC1-207ENST00000588867 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
NPC1-207ENST00000588867 ADAMTSL1Q8N6G6 1762 aa17.29■□□□□ 0.36
NPC1-207ENST00000588867 CYP21A2P08686 494 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 HAND2P61296 217 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
NPC1-207ENST00000588867 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
NPC1-207ENST00000588867 TEX11Q8IYF3 940 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 TGFBRAP1Q8WUH2 860 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 KIF2CQ99661 725 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 ZNF213O14771 459 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 ANAPC15P60006 121 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 ALX1Q15699 326 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
NPC1-207ENST00000588867 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
NPC1-207ENST00000588867 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
NPC1-207ENST00000588867 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
NPC1-207ENST00000588867 RHBDL3P58872 404 aa17.27■□□□□ 0.36
NPC1-207ENST00000588867 UTRNP46939 3433 aa17.27■□□□□ 0.36
NPC1-207ENST00000588867 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
NPC1-207ENST00000588867 DLGAP5Q15398 846 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 CDC42EP5Q6NZY7 148 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 KCNB2Q92953 911 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
NPC1-207ENST00000588867 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
NPC1-207ENST00000588867 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
NPC1-207ENST00000588867 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 GIMAP6Q6P9H5 292 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 GPC2Q8N158 579 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
NPC1-207ENST00000588867 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 CNOT7Q9UIV1 285 aaKnown RBP17.25■□□□□ 0.35
NPC1-207ENST00000588867 BAZ2AQ9UIF9 1905 aaKnown RBP17.25■□□□□ 0.35
NPC1-207ENST00000588867 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 USP17L21D6R901 530 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 PICALMQ13492 652 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
NPC1-207ENST00000588867 DPF2Q92785 391 aa17.25■□□□□ 0.35
NPC1-207ENST00000588867 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
NPC1-207ENST00000588867 ZMYM6O95789 1325 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 CTR9Q6PD62 1173 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 MICALL2Q8IY33 904 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 MYOZ2Q9NPC6 264 aa17.24■□□□□ 0.35
NPC1-207ENST00000588867 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
NPC1-207ENST00000588867 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 CACNB3P54284 484 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 KRT32Q14532 448 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 RABEP1Q15276 862 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 TSGA10IPQ3SY00 556 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 SAP30BPQ9UHR5 308 aaKnown RBP17.23■□□□□ 0.35
NPC1-207ENST00000588867 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 E7EWF7 191 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
NPC1-207ENST00000588867 PPARAQ07869 468 aa17.23■□□□□ 0.35
NPC1-207ENST00000588867 UPF3BQ9BZI7 483 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms