RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PRC1O43663 620 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 ME1P48163 572 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 LINC00116Q8NCU8 138 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.21
NEDD4L-223ENST00000588516 NRDCO43847 1150 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 CTDNEP1O95476 244 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 STK38Q15208 465 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.2
NEDD4L-223ENST00000588516 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 PCNTO95613 3336 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 PDE8AO60658 829 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 ALX1Q15699 326 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 MB21D2Q8IYB1 491 aaPredicted RBP16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 WASF1Q92558 559 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 BPIFA3Q9BQP9 254 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 MYH3P11055 1940 aa16.32■□□□□ 0.2
NEDD4L-223ENST00000588516 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 FGAP02671 866 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 SIK1P57059 783 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 GSDMDP57764 484 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
NEDD4L-223ENST00000588516 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 GPAA1O43292 621 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 MYO1BO43795 1136 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 ADD2P35612 726 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 CTSWP56202 376 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 PIGBQ92521 554 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 DNAJC25Q9H1X3 360 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 IMPACTQ9P2X3 320 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
NEDD4L-223ENST00000588516 KIF2AO00139 706 aaPredicted RBP16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 TUBB4AP04350 444 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 GNAT2P19087 354 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 ZAP70P43403 619 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 TRIM29Q14134 588 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 IQCB1Q15051 598 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 SYCP1Q15431 976 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 ANGEL1Q9UNK9 670 aaKnown RBP16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
NEDD4L-223ENST00000588516 SPTLC2O15270 562 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 PDE8BO95263 885 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 SLC5A1P13866 664 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 ITGA6P23229 1130 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 ARID4AP29374 1257 aaPredicted RBP16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 IL6STP40189 918 aaPredicted RBP16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 PUM3Q15397 648 aaKnown RBP16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 LPIN2Q92539 896 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 FAM89AQ96GI7 184 aa16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
NEDD4L-223ENST00000588516 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 AP5Z1O43299 807 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 PTGS1P23219 599 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 CMA1P23946 247 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 ADORA1P30542 326 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 MAP3K12Q12852 859 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 SLC9C2Q5TAH2 1124 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms