RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
CNN1-207ENST00000588468 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 IGSF3O75054 1194 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
CNN1-207ENST00000588468 TNS4Q8IZW8 715 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 SPATA5Q8NB90 893 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
CNN1-207ENST00000588468 TMEM39BQ9GZU3 492 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
CNN1-207ENST00000588468 MROH7-TTC4A0A0A0MT08 1334 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
CNN1-207ENST00000588468 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 PRKG1Q13976 671 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 ANKRD13AQ8IZ07 590 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
CNN1-207ENST00000588468 ABCF2Q9UG63 623 aa12.22□□□□□ -0.45
CNN1-207ENST00000588468 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
CNN1-207ENST00000588468 USP2O75604 605 aaPredicted RBP12.21□□□□□ -0.45
CNN1-207ENST00000588468 MAP4K4O95819 1239 aaPredicted RBP12.21□□□□□ -0.45
CNN1-207ENST00000588468 MCAMP43121 646 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 CACNB3P54284 484 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 GSTO1P78417 241 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 TTC39AQ5SRH9 613 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 CDC42EP5Q6NZY7 148 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 FAM151AQ8WW52 585 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 CSRNP1Q96S65 589 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 DBNDD2Q9BQY9 259 aa12.21□□□□□ -0.45
CNN1-207ENST00000588468 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
CNN1-207ENST00000588468 MYH7P12883 1935 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
CNN1-207ENST00000588468 MECOMQ03112 1051 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 PI16Q6UXB8 463 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 DBNLQ9UJU6 430 aaKnown RBP12.2□□□□□ -0.46
CNN1-207ENST00000588468 FZD1Q9UP38 647 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
CNN1-207ENST00000588468 ENTPD3O75355 529 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 LDHCP07864 332 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 TM4SF4P48230 202 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
CNN1-207ENST00000588468 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 USP40Q9NVE5 1235 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 RNF186Q9NXI6 227 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 TSKSQ9UJT2 592 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 CSADQ9Y600 493 aa12.19□□□□□ -0.46
CNN1-207ENST00000588468 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 GPR75-ASB3A0A0A6YYF3 556 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 RAB11FIP3O75154 756 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
CNN1-207ENST00000588468 BTDP43251 543 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 INHBEP58166 350 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 NFIAQ12857 509 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 VGLL4Q14135 290 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 TMED8Q6PL24 325 aaPredicted RBP12.18□□□□□ -0.46
CNN1-207ENST00000588468 AACSQ86V21 672 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 NSUN4Q96CB9 384 aaKnown RBP12.18□□□□□ -0.46
CNN1-207ENST00000588468 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
CNN1-207ENST00000588468 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
CNN1-207ENST00000588468 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 LRP2BPQ9P2M1 347 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
CNN1-207ENST00000588468 PTPRFP10586 1907 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 TRPA1O75762 1119 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 ALDH1A1P00352 501 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 RGS3P49796 1198 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
CNN1-207ENST00000588468 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
CNN1-207ENST00000588468 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.17□□□□□ -0.46
CNN1-207ENST00000588468 SIRT2Q8IXJ6 389 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 ZNF384Q8TF68 577 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 WRNIP1Q96S55 665 aa12.17□□□□□ -0.46
CNN1-207ENST00000588468 NOL10Q9BSC4 688 aaKnown RBP12.17□□□□□ -0.46
CNN1-207ENST00000588468 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 MYH1P12882 1939 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
CNN1-207ENST00000588468 PLCG2P16885 1265 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
CNN1-207ENST00000588468 TCP10Q12799 353 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
CNN1-207ENST00000588468 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 CERS3Q8IU89 383 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
CNN1-207ENST00000588468 OPTNQ96CV9 577 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms