RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 DDX19BQ9UMR2 479 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 NOP58Q9Y2X3 529 aaKnown RBP24.06■■□□□ 1.44
TPM4-208ENST00000588410 FPGT-TNNI3KV9GXZ4 949 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 ZBTB48P10074 688 aaPredicted RBP24.05■■□□□ 1.44
TPM4-208ENST00000588410 TM4SF4P48230 202 aa24.05■■□□□ 1.44
TPM4-208ENST00000588410 CCDC158Q5M9N0 1113 aa24.05■■□□□ 1.44
TPM4-208ENST00000588410 WNK4Q96J92 1243 aa24.05■■□□□ 1.44
TPM4-208ENST00000588410 CHMP4BQ9H444 224 aaKnown RBP24.05■■□□□ 1.44
TPM4-208ENST00000588410 COG6Q9Y2V7 657 aa24.05■■□□□ 1.44
TPM4-208ENST00000588410 MANSC4A6NHS7 340 aaPredicted RBP24.04■■□□□ 1.44
TPM4-208ENST00000588410 ARID4AP29374 1257 aaPredicted RBP24.04■■□□□ 1.44
TPM4-208ENST00000588410 TTC39AQ5SRH9 613 aa24.04■■□□□ 1.44
TPM4-208ENST00000588410 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.04■■□□□ 1.44
TPM4-208ENST00000588410 INHBEP58166 350 aa24.03■■□□□ 1.44
TPM4-208ENST00000588410 MAP3K9P80192 1104 aa24.03■■□□□ 1.44
TPM4-208ENST00000588410 FAM151AQ8WW52 585 aa24.03■■□□□ 1.44
TPM4-208ENST00000588410 ELP3Q9H9T3 547 aa24.03■■□□□ 1.44
TPM4-208ENST00000588410 CSADQ9Y600 493 aa24.03■■□□□ 1.44
TPM4-208ENST00000588410 TCP10Q12799 353 aa24.02■■□□□ 1.44
TPM4-208ENST00000588410 DCAF15Q66K64 600 aa24.02■■□□□ 1.44
TPM4-208ENST00000588410 DBNDD2Q9BQY9 259 aa24.02■■□□□ 1.44
TPM4-208ENST00000588410 ECM29Q5VYK3 1845 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 GSTO1P78417 241 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 MECOMQ03112 1051 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 PI16Q6UXB8 463 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 RAI14Q9P0K7 980 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 GAKO14976 1311 aa24.01■■□□□ 1.43
TPM4-208ENST00000588410 MCAMP43121 646 aa24■■□□□ 1.43
TPM4-208ENST00000588410 NFIAQ12857 509 aa24■■□□□ 1.43
TPM4-208ENST00000588410 HSP90AB4PQ58FF6 505 aa24■■□□□ 1.43
TPM4-208ENST00000588410 PPP1R3FQ6ZSY5 799 aaPredicted RBP24■■□□□ 1.43
TPM4-208ENST00000588410 TBC1D9Q6ZT07 1266 aa24■■□□□ 1.43
TPM4-208ENST00000588410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24■■□□□ 1.43
TPM4-208ENST00000588410 FAM163AQ96GL9 167 aaPredicted RBP24■■□□□ 1.43
TPM4-208ENST00000588410 LRP2BPQ9P2M1 347 aa24■■□□□ 1.43
TPM4-208ENST00000588410 RPAP1Q9BWH6 1393 aaPredicted RBP24■■□□□ 1.43
TPM4-208ENST00000588410 HMMRO75330 724 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 TBC1D8O95759 1140 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 ALDH1A1P00352 501 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 LDHCP07864 332 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 BTDP43251 543 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 VGLL4Q14135 290 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 RPAP2Q8IXW5 612 aaPredicted RBP23.99■■□□□ 1.43
TPM4-208ENST00000588410 OPTNQ96CV9 577 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 WRNIP1Q96S55 665 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 ZNF341Q9BYN7 854 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 EXOC6BQ9Y2D4 811 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 MROH7-TTC4A0A0A0MT08 1334 aa23.99■■□□□ 1.43
TPM4-208ENST00000588410 DGKZQ13574 1117 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 MIGA2Q7L4E1 593 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 ABHD8Q96I13 439 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 SNRKQ9NRH2 765 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 ZBTB40Q9NUA8 1239 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 FAM198AQ9UFP1 575 aa23.98■■□□□ 1.43
TPM4-208ENST00000588410 GJA5P36382 358 aa23.97■■□□□ 1.43
TPM4-208ENST00000588410 PDE3AQ14432 1141 aa23.97■■□□□ 1.43
TPM4-208ENST00000588410 OTUD7BQ6GQQ9 843 aa23.97■■□□□ 1.43
TPM4-208ENST00000588410 IFNL1Q8IU54 200 aa23.97■■□□□ 1.43
TPM4-208ENST00000588410 IDI2Q9BXS1 227 aa23.97■■□□□ 1.43
TPM4-208ENST00000588410 CCDC8Q9H0W5 538 aaPredicted RBP23.97■■□□□ 1.43
TPM4-208ENST00000588410 ENTPD3O75355 529 aa23.96■■□□□ 1.43
TPM4-208ENST00000588410 RGS3P49796 1198 aa23.96■■□□□ 1.43
TPM4-208ENST00000588410 NSUN4Q96CB9 384 aaKnown RBP23.96■■□□□ 1.43
TPM4-208ENST00000588410 EAF2Q96CJ1 260 aaPredicted RBP23.96■■□□□ 1.43
TPM4-208ENST00000588410 ZNF512BQ96KM6 892 aaPredicted RBP23.96■■□□□ 1.43
TPM4-208ENST00000588410 DBNLQ9UJU6 430 aaKnown RBP23.96■■□□□ 1.43
TPM4-208ENST00000588410 GPR75-ASB3A0A0A6YYF3 556 aa23.95■■□□□ 1.42
TPM4-208ENST00000588410 ZSCAN29Q8IWY8 852 aaPredicted RBP23.95■■□□□ 1.42
TPM4-208ENST00000588410 OTUD5Q96G74 571 aa23.95■■□□□ 1.42
TPM4-208ENST00000588410 MCOLN1Q9GZU1 580 aa23.95■■□□□ 1.42
TPM4-208ENST00000588410 TLR7Q9NYK1 1049 aaKnown RBP23.95■■□□□ 1.42
TPM4-208ENST00000588410 AACSQ86V21 672 aa23.94■■□□□ 1.42
TPM4-208ENST00000588410 ZKSCAN4Q969J2 545 aaPredicted RBP23.94■■□□□ 1.42
TPM4-208ENST00000588410 NOL10Q9BSC4 688 aaKnown RBP23.94■■□□□ 1.42
TPM4-208ENST00000588410 GTF2A2P52657 109 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 PICALMQ13492 652 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 C20orf194Q5TEA3 1177 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 ERO1BQ86YB8 467 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 ZFPM1Q8IX07 1006 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 CNKSR2Q8WXI2 1034 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 SNCAIPQ9Y6H5 919 aa23.93■■□□□ 1.42
TPM4-208ENST00000588410 MYH13Q9UKX3 1938 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 SPDYE5A6NIY4 337 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 GPR25O00155 361 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 APBB1O00213 710 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 IGF2BP3O00425 579 aaKnown RBP eCLIP23.92■■□□□ 1.42
TPM4-208ENST00000588410 MAP4K4O95819 1239 aaPredicted RBP23.92■■□□□ 1.42
TPM4-208ENST00000588410 NAA16Q6N069 864 aaPredicted RBP23.92■■□□□ 1.42
TPM4-208ENST00000588410 RHPN1Q8TCX5 695 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 ZNF384Q8TF68 577 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 ZNF296Q8WUU4 475 aaPredicted RBP23.92■■□□□ 1.42
TPM4-208ENST00000588410 CFHR5Q9BXR6 569 aa23.92■■□□□ 1.42
TPM4-208ENST00000588410 WDHD1O75717 1129 aaPredicted RBP23.91■■□□□ 1.42
TPM4-208ENST00000588410 ZAP70P43403 619 aa23.91■■□□□ 1.42
TPM4-208ENST00000588410 NOM1Q5C9Z4 860 aaKnown RBP23.91■■□□□ 1.42
TPM4-208ENST00000588410 CTU1Q7Z7A3 348 aaKnown RBP23.91■■□□□ 1.42
TPM4-208ENST00000588410 KIF1BPQ96EK5 621 aa23.91■■□□□ 1.42
TPM4-208ENST00000588410 IL1RAPL2Q9NP60 686 aa23.91■■□□□ 1.42
TPM4-208ENST00000588410 CCL15-CCL14A0A0B4J2E2 113 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms