RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 VPS37DQ86XT2 251 aa17.36■□□□□ 0.37
CLPTM1-208ENST00000588274 ZNF112Q9UJU3 913 aa17.36■□□□□ 0.37
CLPTM1-208ENST00000588274 KCNH4Q9UQ05 1017 aa17.36■□□□□ 0.37
CLPTM1-208ENST00000588274 MAST3O60307 1309 aa17.36■□□□□ 0.37
CLPTM1-208ENST00000588274 PPATQ06203 517 aa17.35■□□□□ 0.37
CLPTM1-208ENST00000588274 NFIAQ12857 509 aa17.35■□□□□ 0.37
CLPTM1-208ENST00000588274 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
CLPTM1-208ENST00000588274 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
CLPTM1-208ENST00000588274 PTPRCP08575 1304 aa17.35■□□□□ 0.37
CLPTM1-208ENST00000588274 DIXDC1Q155Q3 683 aa17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 FAM198AQ9UFP1 575 aa17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-208ENST00000588274 DOCK2Q92608 1830 aa17.33■□□□□ 0.37
CLPTM1-208ENST00000588274 LAMA3Q16787 3333 aa17.33■□□□□ 0.37
CLPTM1-208ENST00000588274 EYA2O00167 538 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 PRDX5P30044 214 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 NOL9Q5SY16 702 aaKnown RBP17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 FAM151AQ8WW52 585 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 SSH1Q8WYL5 1049 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 TRIOBPQ9H2D6 2365 aa17.33■□□□□ 0.36
CLPTM1-208ENST00000588274 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 GNRH1P01148 92 aa17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 ARHGEF6Q15052 776 aa17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 MTFR1Q15390 333 aa17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 DCAF15Q66K64 600 aa17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 CPA4Q9UI42 421 aa17.32■□□□□ 0.36
CLPTM1-208ENST00000588274 ZBTB22O15209 634 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 ANP32CO43423 234 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 OSBPP22059 807 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 PRMT2P55345 433 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 ZFPM1Q8IX07 1006 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 LPIN2Q92539 896 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 SRRDQ9UH36 339 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 PTPRFP10586 1907 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
CLPTM1-208ENST00000588274 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 H0YGN5 161 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 PDHXO00330 501 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 SLC4A8Q2Y0W8 1093 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 GPAT2Q6NUI2 795 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
CLPTM1-208ENST00000588274 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
CLPTM1-208ENST00000588274 BCRP11274 1271 aa17.29■□□□□ 0.36
CLPTM1-208ENST00000588274 TCP10Q12799 353 aa17.29■□□□□ 0.36
CLPTM1-208ENST00000588274 MGAMO43451 1857 aa17.29■□□□□ 0.36
CLPTM1-208ENST00000588274 SLC5A1P13866 664 aa17.28■□□□□ 0.36
CLPTM1-208ENST00000588274 PSMC4P43686 418 aa17.28■□□□□ 0.36
CLPTM1-208ENST00000588274 KIF22Q14807 665 aa17.28■□□□□ 0.36
CLPTM1-208ENST00000588274 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
CLPTM1-208ENST00000588274 GAKO14976 1311 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 DOCK1Q14185 1865 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 CIAO1O76071 339 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 PHKA1P46020 1223 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 PRO3102Q9H379 93 aa17.27■□□□□ 0.36
CLPTM1-208ENST00000588274 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 CYP2C8P10632 490 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 GJA8P48165 433 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 PRKCZQ05513 592 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
CLPTM1-208ENST00000588274 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 A0A0G2JLL6 359 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 GRK4P32298 578 aa17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 PRRT2Q7Z6L0 340 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 MYH2Q9UKX2 1941 aa17.25■□□□□ 0.35
CLPTM1-208ENST00000588274 E9PSI1 815 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 CXCL11O14625 94 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 SEMA3EO15041 775 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 LDHBP07195 334 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 ADORA1P30542 326 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 RGS3P49796 1198 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 ZNF384Q8TF68 577 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 SIL1Q9H173 461 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 USP40Q9NVE5 1235 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 GABRQQ9UN88 632 aa17.24■□□□□ 0.35
CLPTM1-208ENST00000588274 LOC285556D6RIA3 1793 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 GJB1P08034 283 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms