RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 AK9Q5TCS8 1911 aa13.97□□□□□ -0.17
VPS4B-202ENST00000588059 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 PDHXO00330 501 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
VPS4B-202ENST00000588059 HOXD10P28358 340 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 INPP5BP32019 993 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 MOGSQ13724 837 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 KAZALD1Q96I82 304 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 SUCLG2Q96I99 432 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 ZNF341Q9BYN7 854 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.17
VPS4B-202ENST00000588059 KCNH4Q9UQ05 1017 aa13.96□□□□□ -0.17
VPS4B-202ENST00000588059 ALPK3Q96L96 1907 aa13.96□□□□□ -0.18
VPS4B-202ENST00000588059 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
VPS4B-202ENST00000588059 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
VPS4B-202ENST00000588059 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
VPS4B-202ENST00000588059 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
VPS4B-202ENST00000588059 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
VPS4B-202ENST00000588059 RNF208Q9H0X6 261 aa13.95□□□□□ -0.18
VPS4B-202ENST00000588059 MAST3O60307 1309 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 PTPRFP10586 1907 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
VPS4B-202ENST00000588059 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
VPS4B-202ENST00000588059 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 FARP2O94887 1054 aaPredicted RBP13.94□□□□□ -0.18
VPS4B-202ENST00000588059 BCRP11274 1271 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 PRKCZQ05513 592 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
VPS4B-202ENST00000588059 ZNF112Q9UJU3 913 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 NR2E3Q9Y5X4 410 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
VPS4B-202ENST00000588059 COL6A3P12111 3177 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 DLL1O00548 723 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 UBXN2AP68543 259 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 LRRC24Q50LG9 513 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
VPS4B-202ENST00000588059 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 METTL24Q5JXM2 366 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 UNC93B1Q9H1C4 597 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
VPS4B-202ENST00000588059 SUGT1Q9Y2Z0 365 aa13.93□□□□□ -0.18
VPS4B-202ENST00000588059 A0A1W2PPC1 479 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 SOX1O00570 391 aaPredicted RBP13.92□□□□□ -0.18
VPS4B-202ENST00000588059 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
VPS4B-202ENST00000588059 BCAMP50895 628 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 FCGRTP55899 365 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 RABL6Q3YEC7 729 aaPredicted RBP13.92□□□□□ -0.18
VPS4B-202ENST00000588059 NOL9Q5SY16 702 aaKnown RBP13.92□□□□□ -0.18
VPS4B-202ENST00000588059 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 SLC4A10Q6U841 1118 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 SLC17A8Q8NDX2 589 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 FAM151AQ8WW52 585 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
VPS4B-202ENST00000588059 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
VPS4B-202ENST00000588059 UTYO14607 1347 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 PDE8BO95263 885 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 CYP2C8P10632 490 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 TCP10Q12799 353 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
VPS4B-202ENST00000588059 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
VPS4B-202ENST00000588059 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 A0A0C4DFX4 3053 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 SGPL1O95470 568 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 NFIAQ12857 509 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 WDR63Q8IWG1 891 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 DAGLAQ9Y4D2 1042 aa13.9□□□□□ -0.18
VPS4B-202ENST00000588059 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 ATRNL1Q5VV63 1379 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 CXCL11O14625 94 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 ADCY3O60266 1144 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 EVI5O60447 810 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 ELNP15502 786 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 FGFR2P21802 821 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 CDC42EP5Q6NZY7 148 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 KLHDC4Q8TBB5 520 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 LRCH3Q96II8 777 aa13.89□□□□□ -0.19
VPS4B-202ENST00000588059 INHAP05111 366 aa13.88□□□□□ -0.19
VPS4B-202ENST00000588059 FLT3LGP49771 235 aa13.88□□□□□ -0.19
VPS4B-202ENST00000588059 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
VPS4B-202ENST00000588059 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
VPS4B-202ENST00000588059 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
VPS4B-202ENST00000588059 FAM198AQ9UFP1 575 aa13.88□□□□□ -0.19
VPS4B-202ENST00000588059 A0A0G2JLL6 359 aaPredicted RBP13.87□□□□□ -0.19
VPS4B-202ENST00000588059 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
VPS4B-202ENST00000588059 IRF5Q13568 498 aa13.87□□□□□ -0.19
VPS4B-202ENST00000588059 PRRT2Q7Z6L0 340 aaPredicted RBP13.87□□□□□ -0.19
VPS4B-202ENST00000588059 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
VPS4B-202ENST00000588059 PXYLP1Q8TE99 480 aa13.87□□□□□ -0.19
VPS4B-202ENST00000588059 DEFB118Q96PH6 123 aa13.87□□□□□ -0.19
VPS4B-202ENST00000588059 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
VPS4B-202ENST00000588059 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
VPS4B-202ENST00000588059 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms