RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-207ENST00000587256 MECOMQ03112 1051 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 CDC42EP5Q6NZY7 148 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 RASAL3Q86YV0 1011 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-207ENST00000587256 WBP1LQ9NX94 342 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 MROH7-TTC4A0A0A0MT08 1334 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 GAKO14976 1311 aa18.14■□□□□ 0.49
ATG4D-207ENST00000587256 MYH2Q9UKX2 1941 aa18.13■□□□□ 0.49
ATG4D-207ENST00000587256 IFIT2P09913 472 aaKnown RBP18.13■□□□□ 0.49
ATG4D-207ENST00000587256 IREB2P48200 963 aaKnown RBP18.13■□□□□ 0.49
ATG4D-207ENST00000587256 GSTO1P78417 241 aa18.13■□□□□ 0.49
ATG4D-207ENST00000587256 FAM83AQ86UY5 434 aa18.13■□□□□ 0.49
ATG4D-207ENST00000587256 CDAN1Q8IWY9 1227 aa18.13■□□□□ 0.49
ATG4D-207ENST00000587256 USP40Q9NVE5 1235 aa18.13■□□□□ 0.49
ATG4D-207ENST00000587256 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
ATG4D-207ENST00000587256 RPAP1Q9BWH6 1393 aaPredicted RBP18.13■□□□□ 0.49
ATG4D-207ENST00000587256 FOXN1O15353 648 aa18.12■□□□□ 0.49
ATG4D-207ENST00000587256 BTDP43251 543 aa18.12■□□□□ 0.49
ATG4D-207ENST00000587256 TEPSINQ96N21 525 aa18.12■□□□□ 0.49
ATG4D-207ENST00000587256 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
ATG4D-207ENST00000587256 ZIC5Q96T25 663 aa18.12■□□□□ 0.49
ATG4D-207ENST00000587256 LDHCP07864 332 aa18.11■□□□□ 0.49
ATG4D-207ENST00000587256 ZAP70P43403 619 aa18.11■□□□□ 0.49
ATG4D-207ENST00000587256 KIF23Q02241 960 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-207ENST00000587256 NFIAQ12857 509 aa18.11■□□□□ 0.49
ATG4D-207ENST00000587256 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
ATG4D-207ENST00000587256 NSUN4Q96CB9 384 aaKnown RBP18.11■□□□□ 0.49
ATG4D-207ENST00000587256 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
ATG4D-207ENST00000587256 CYP2E1P05181 493 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-207ENST00000587256 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-207ENST00000587256 TCP10Q12799 353 aa18.1■□□□□ 0.49
ATG4D-207ENST00000587256 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
ATG4D-207ENST00000587256 HOOK2Q96ED9 719 aa18.1■□□□□ 0.49
ATG4D-207ENST00000587256 FAM163AQ96GL9 167 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-207ENST00000587256 NOL10Q9BSC4 688 aaKnown RBP18.1■□□□□ 0.49
ATG4D-207ENST00000587256 LRRCC1Q9C099 1032 aa18.1■□□□□ 0.49
ATG4D-207ENST00000587256 OTOFQ9HC10 1997 aa18.1■□□□□ 0.49
ATG4D-207ENST00000587256 MKRN3Q13064 507 aaKnown RBP18.09■□□□□ 0.49
ATG4D-207ENST00000587256 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
ATG4D-207ENST00000587256 ZNF384Q8TF68 577 aa18.09■□□□□ 0.49
ATG4D-207ENST00000587256 FAM151AQ8WW52 585 aa18.09■□□□□ 0.49
ATG4D-207ENST00000587256 PIH1D3Q9NQM4 214 aaKnown RBP18.09■□□□□ 0.49
ATG4D-207ENST00000587256 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.49
ATG4D-207ENST00000587256 GPR75-ASB3A0A0A6YYF3 556 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 USP2O75604 605 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-207ENST00000587256 IDH1O75874 414 aaKnown RBP18.08■□□□□ 0.48
ATG4D-207ENST00000587256 RGS3P49796 1198 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 SLC10A4Q96EP9 437 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 CLMNQ96JQ2 1002 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 NDUFB9Q9Y6M9 179 aa18.08■□□□□ 0.48
ATG4D-207ENST00000587256 CA12O43570 354 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 PICALMQ13492 652 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 DCAF15Q66K64 600 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 IDI2Q9BXS1 227 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 FAM198AQ9UFP1 575 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 PCDHB15Q9Y5E8 787 aa18.07■□□□□ 0.48
ATG4D-207ENST00000587256 UNCXA6NJT0 531 aa18.06■□□□□ 0.48
ATG4D-207ENST00000587256 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
ATG4D-207ENST00000587256 ENTPD3O75355 529 aa18.06■□□□□ 0.48
ATG4D-207ENST00000587256 HSPA8P11142 646 aaKnown RBP18.06■□□□□ 0.48
ATG4D-207ENST00000587256 DNAJC2Q99543 621 aaKnown RBP18.06■□□□□ 0.48
ATG4D-207ENST00000587256 DCTPP1Q9H773 170 aa18.06■□□□□ 0.48
ATG4D-207ENST00000587256 TSKSQ9UJT2 592 aa18.06■□□□□ 0.48
ATG4D-207ENST00000587256 CSADQ9Y600 493 aa18.06■□□□□ 0.48
ATG4D-207ENST00000587256 DOCK2Q92608 1830 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 IGSF3O75054 1194 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-207ENST00000587256 BAG3O95817 575 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 LBX1P52954 281 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 ZSCAN29Q8IWY8 852 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-207ENST00000587256 REM2Q8IYK8 340 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-207ENST00000587256 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 WRNIP1Q96S55 665 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 ELP3Q9H9T3 547 aa18.05■□□□□ 0.48
ATG4D-207ENST00000587256 MAP4K4O95819 1239 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 RHBDL3P58872 404 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 VGLL4Q14135 290 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 MIGA2Q7L4E1 593 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 TEX11Q8IYF3 940 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 DDX4Q9NQI0 724 aaKnown RBP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATG4D-207ENST00000587256 AK9Q5TCS8 1911 aa18.04■□□□□ 0.48
ATG4D-207ENST00000587256 MYO5AQ9Y4I1 1855 aaKnown RBP18.03■□□□□ 0.48
ATG4D-207ENST00000587256 GOLIM4O00461 696 aa18.03■□□□□ 0.48
ATG4D-207ENST00000587256 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
ATG4D-207ENST00000587256 PLCG2P16885 1265 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms