RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 HMG20BQ9P0W2 317 aa21.79■■□□□ 1.08
TPM4-206ENST00000587201 NOP58Q9Y2X3 529 aaKnown RBP21.79■■□□□ 1.08
TPM4-206ENST00000587201 FPGT-TNNI3KV9GXZ4 949 aa21.79■■□□□ 1.08
TPM4-206ENST00000587201 ARID4AP29374 1257 aaPredicted RBP21.78■■□□□ 1.08
TPM4-206ENST00000587201 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
TPM4-206ENST00000587201 SLF2Q8IX21 1173 aa21.78■■□□□ 1.08
TPM4-206ENST00000587201 SPATA5Q8NB90 893 aa21.78■■□□□ 1.08
TPM4-206ENST00000587201 HOOK2Q96ED9 719 aa21.78■■□□□ 1.08
TPM4-206ENST00000587201 CASP8AP2Q9UKL3 1982 aa21.78■■□□□ 1.08
TPM4-206ENST00000587201 MANSC4A6NHS7 340 aaPredicted RBP21.77■■□□□ 1.08
TPM4-206ENST00000587201 UQCRFS1P1P0C7P4 283 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 MAP3K9P80192 1104 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 TCP10Q12799 353 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 FAM151AQ8WW52 585 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 ELP3Q9H9T3 547 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 DDX19BQ9UMR2 479 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
TPM4-206ENST00000587201 TBC1D8O95759 1140 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 TTC39AQ5SRH9 613 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 PI16Q6UXB8 463 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 DBNDD2Q9BQY9 259 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 GAKO14976 1311 aa21.76■■□□□ 1.07
TPM4-206ENST00000587201 RPAP1Q9BWH6 1393 aaPredicted RBP21.75■■□□□ 1.07
TPM4-206ENST00000587201 MCAMP43121 646 aa21.75■■□□□ 1.07
TPM4-206ENST00000587201 INHBEP58166 350 aa21.75■■□□□ 1.07
TPM4-206ENST00000587201 NFIAQ12857 509 aa21.75■■□□□ 1.07
TPM4-206ENST00000587201 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.75■■□□□ 1.07
TPM4-206ENST00000587201 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.75■■□□□ 1.07
TPM4-206ENST00000587201 CSADQ9Y600 493 aa21.75■■□□□ 1.07
TPM4-206ENST00000587201 GJA5P36382 358 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 MECOMQ03112 1051 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 DGKZQ13574 1117 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 VGLL4Q14135 290 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 DCAF15Q66K64 600 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 TBC1D9Q6ZT07 1266 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 OPTNQ96CV9 577 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 ABHD8Q96I13 439 aa21.74■■□□□ 1.07
TPM4-206ENST00000587201 MYH2Q9UKX2 1941 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 BTDP43251 543 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 FAM163AQ96GL9 167 aaPredicted RBP21.73■■□□□ 1.07
TPM4-206ENST00000587201 WRNIP1Q96S55 665 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 MCOLN1Q9GZU1 580 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 RAI14Q9P0K7 980 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 FAM198AQ9UFP1 575 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 OTOFQ9HC10 1997 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 MROH7-TTC4A0A0A0MT08 1334 aa21.73■■□□□ 1.07
TPM4-206ENST00000587201 ALDH1A1P00352 501 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 GSTO1P78417 241 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 MIGA2Q7L4E1 593 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 IFNL1Q8IU54 200 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
TPM4-206ENST00000587201 ZNF341Q9BYN7 854 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 CCDC8Q9H0W5 538 aaPredicted RBP21.72■■□□□ 1.07
TPM4-206ENST00000587201 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
TPM4-206ENST00000587201 SNRKQ9NRH2 765 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 LRP2BPQ9P2M1 347 aa21.72■■□□□ 1.07
TPM4-206ENST00000587201 LDHCP07864 332 aa21.71■■□□□ 1.07
TPM4-206ENST00000587201 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
TPM4-206ENST00000587201 RPAP2Q8IXW5 612 aaPredicted RBP21.71■■□□□ 1.07
TPM4-206ENST00000587201 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
TPM4-206ENST00000587201 NSUN4Q96CB9 384 aaKnown RBP21.71■■□□□ 1.07
TPM4-206ENST00000587201 IDI2Q9BXS1 227 aa21.71■■□□□ 1.07
TPM4-206ENST00000587201 RGS3P49796 1198 aa21.7■■□□□ 1.06
TPM4-206ENST00000587201 HSP90AB4PQ58FF6 505 aa21.7■■□□□ 1.06
TPM4-206ENST00000587201 ZNF384Q8TF68 577 aa21.7■■□□□ 1.06
TPM4-206ENST00000587201 ZKSCAN4Q969J2 545 aaPredicted RBP21.7■■□□□ 1.06
TPM4-206ENST00000587201 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
TPM4-206ENST00000587201 ZBTB40Q9NUA8 1239 aa21.7■■□□□ 1.06
TPM4-206ENST00000587201 TLR7Q9NYK1 1049 aaKnown RBP21.7■■□□□ 1.06
TPM4-206ENST00000587201 DBNLQ9UJU6 430 aaKnown RBP21.7■■□□□ 1.06
TPM4-206ENST00000587201 GPR75-ASB3A0A0A6YYF3 556 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 GPR25O00155 361 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 IGF2BP3O00425 579 aaKnown RBP eCLIP21.69■■□□□ 1.06
TPM4-206ENST00000587201 HMMRO75330 724 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 ENTPD3O75355 529 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 OTUD7BQ6GQQ9 843 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 ZNF296Q8WUU4 475 aaPredicted RBP21.69■■□□□ 1.06
TPM4-206ENST00000587201 OTUD5Q96G74 571 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 ZNF512BQ96KM6 892 aaPredicted RBP21.69■■□□□ 1.06
TPM4-206ENST00000587201 CFHR5Q9BXR6 569 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
TPM4-206ENST00000587201 PICALMQ13492 652 aa21.68■■□□□ 1.06
TPM4-206ENST00000587201 PDE3AQ14432 1141 aa21.68■■□□□ 1.06
TPM4-206ENST00000587201 ZSCAN29Q8IWY8 852 aaPredicted RBP21.68■■□□□ 1.06
TPM4-206ENST00000587201 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 TESPA1A2RU30 521 aaPredicted RBP21.67■■□□□ 1.06
TPM4-206ENST00000587201 SPDYE5A6NIY4 337 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 WDHD1O75717 1129 aaPredicted RBP21.67■■□□□ 1.06
TPM4-206ENST00000587201 GTF2A2P52657 109 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 AACSQ86V21 672 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 ERO1BQ86YB8 467 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 R3HDMLQ9H3Y0 253 aa21.67■■□□□ 1.06
TPM4-206ENST00000587201 RFX7Q2KHR2 1363 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 CYP2E1P05181 493 aaPredicted RBP21.66■■□□□ 1.06
TPM4-206ENST00000587201 INPP5BP32019 993 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 ZAP70P43403 619 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms