RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
CXXC1-208ENST00000587170 SH3TC2Q8TF17 1288 aa17.81■□□□□ 0.44
CXXC1-208ENST00000587170 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-208ENST00000587170 SHISA4Q96DD7 197 aa17.81■□□□□ 0.44
CXXC1-208ENST00000587170 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
CXXC1-208ENST00000587170 IQSEC3Q9UPP2 1182 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-208ENST00000587170 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
CXXC1-208ENST00000587170 FGFR2P21802 821 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 PPATQ06203 517 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
CXXC1-208ENST00000587170 SLC4A8Q2Y0W8 1093 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 CAVIN4Q5BKX8 364 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 DCAF15Q66K64 600 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
CXXC1-208ENST00000587170 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
CXXC1-208ENST00000587170 ANKRD23Q86SG2 305 aa17.79■□□□□ 0.44
CXXC1-208ENST00000587170 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
CXXC1-208ENST00000587170 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
CXXC1-208ENST00000587170 H0YGN5 161 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 CTGFP29279 349 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 MOGSQ13724 837 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 UBE2Q1Q7Z7E8 422 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 TRIM47Q96LD4 638 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 SRRDQ9UH36 339 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 ZNF112Q9UJU3 913 aa17.78■□□□□ 0.44
CXXC1-208ENST00000587170 BCAMP50895 628 aa17.77■□□□□ 0.44
CXXC1-208ENST00000587170 PUM3Q15397 648 aaKnown RBP17.77■□□□□ 0.44
CXXC1-208ENST00000587170 ATRNL1Q5VV63 1379 aa17.77■□□□□ 0.43
CXXC1-208ENST00000587170 A0A0C4DFX4 3053 aa17.76■□□□□ 0.43
CXXC1-208ENST00000587170 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-208ENST00000587170 INPP5BP32019 993 aa17.76■□□□□ 0.43
CXXC1-208ENST00000587170 NOL9Q5SY16 702 aaKnown RBP17.76■□□□□ 0.43
CXXC1-208ENST00000587170 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-208ENST00000587170 FAM151AQ8WW52 585 aa17.76■□□□□ 0.43
CXXC1-208ENST00000587170 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-208ENST00000587170 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
CXXC1-208ENST00000587170 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
CXXC1-208ENST00000587170 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
CXXC1-208ENST00000587170 MTFR1Q15390 333 aa17.75■□□□□ 0.43
CXXC1-208ENST00000587170 PTPRCP08575 1304 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 PDHXO00330 501 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
CXXC1-208ENST00000587170 OSBPP22059 807 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 PSMC4P43686 418 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 WDR66Q8TBY9 1149 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 DAGLAQ9Y4D2 1042 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 FOCADQ5VW36 1801 aa17.74■□□□□ 0.43
CXXC1-208ENST00000587170 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 ZBTB22O15209 634 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 MYCP01106 439 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-208ENST00000587170 BCRP11274 1271 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 GRK4P32298 578 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 GJA8P48165 433 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-208ENST00000587170 MIGA2Q7L4E1 593 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 NKX2-3Q8TAU0 364 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
CXXC1-208ENST00000587170 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 GJB1P08034 283 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 HOXD10P28358 340 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
CXXC1-208ENST00000587170 LPIN2Q92539 896 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 CUL9Q8IWT3 2517 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
CXXC1-208ENST00000587170 SIPA1L1O43166 1804 aa17.71■□□□□ 0.43
CXXC1-208ENST00000587170 EYA2O00167 538 aa17.71■□□□□ 0.43
CXXC1-208ENST00000587170 NFIAQ12857 509 aa17.71■□□□□ 0.43
CXXC1-208ENST00000587170 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.43
CXXC1-208ENST00000587170 PARK7Q99497 189 aaKnown RBP17.71■□□□□ 0.43
CXXC1-208ENST00000587170 FAM198AQ9UFP1 575 aa17.71■□□□□ 0.43
CXXC1-208ENST00000587170 CXCL11O14625 94 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 CCL5P13501 91 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 SLC5A1P13866 664 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 DIXDC1Q155Q3 683 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 MAST2Q6P0Q8 1798 aa17.7■□□□□ 0.42
CXXC1-208ENST00000587170 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
CXXC1-208ENST00000587170 PRDX5P30044 214 aa17.69■□□□□ 0.42
CXXC1-208ENST00000587170 SLAIN1Q8ND83 568 aa17.69■□□□□ 0.42
CXXC1-208ENST00000587170 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
CXXC1-208ENST00000587170 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
CXXC1-208ENST00000587170 DDX60LQ5H9U9 1706 aaKnown RBP17.69■□□□□ 0.42
CXXC1-208ENST00000587170 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 A0A0G2JLL6 359 aaPredicted RBP17.68■□□□□ 0.42
CXXC1-208ENST00000587170 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
CXXC1-208ENST00000587170 PRKCZQ05513 592 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 TCP10Q12799 353 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 PRRT2Q7Z6L0 340 aaPredicted RBP17.68■□□□□ 0.42
CXXC1-208ENST00000587170 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
CXXC1-208ENST00000587170 LAMA2P24043 3122 aaKnown RBP17.68■□□□□ 0.42
CXXC1-208ENST00000587170 SEMA3EO15041 775 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms