RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, human

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01140-208	ENST00000587165	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	6.26	□□□□□ -1.41
LINC01140-208	ENST00000587165	DAGLA	Q9Y4D2	1042 aa		6.26	□□□□□ -1.41
LINC01140-208	ENST00000587165	PCDHAC2	Q9Y5I4	1007 aa		6.26	□□□□□ -1.41
LINC01140-208	ENST00000587165	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.26	□□□□□ -1.41
LINC01140-208	ENST00000587165		A0A1B0GUL6	1792 aa		6.26	□□□□□ -1.41
LINC01140-208	ENST00000587165	RAB11FIP3	O75154	756 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	BAG3	O95817	575 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	IFIT2	P09913	472 aa	Known RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	BTD	P43251	543 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	CACNB3	P54284	484 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	INHBE	P58166	350 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	MAP3K9	P80192	1104 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	MKRN3	Q13064	507 aa	Known RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	GRIK5	Q16478	980 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	LDLRAD1	Q5T700	205 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	IFFO2	Q5TF58	517 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	SPRYD7	Q5W111	196 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	TMED8	Q6PL24	325 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	CERS3	Q8IU89	383 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	FAM151A	Q8WW52	585 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	DBNDD2	Q9BQY9	259 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZNF341	Q9BYN7	854 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	HMG20B	Q9P0W2	317 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZBTB47	Q9UFB7	747 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	EXOC6B	Q9Y2D4	811 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	THSD7B	Q9C0I4	1608 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	MROH7-TTC4	A0A0A0MT08	1334 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	GAK	O14976	1311 aa		6.25	□□□□□ -1.41
LINC01140-208	ENST00000587165	APBB1	O00213	710 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	ENTPD3	O75355	529 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	TRPA1	O75762	1119 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	MECOM	Q03112	1051 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	TCP10	Q12799	353 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	MAP3K12	Q12852	859 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	TTF1	Q15361	905 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	NAA16	Q6N069	864 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	CDC42EP5	Q6NZY7	148 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	RHPN1	Q8TCX5	695 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	FAM163A	Q96GL9	167 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	GPATCH3	Q96I76	525 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	WNK4	Q96J92	1243 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	WRNIP1	Q96S55	665 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	CSRNP1	Q96S65	589 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	TRIM34	Q9BYJ4	488 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	BCL11A	Q9H165	835 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	ELP3	Q9H9T3	547 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZBTB40	Q9NUA8	1239 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	RNF186	Q9NXI6	227 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	TSKS	Q9UJT2	592 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	ARAP2	Q8WZ64	1704 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	AOX1	Q06278	1338 aa		6.24	□□□□□ -1.41
LINC01140-208	ENST00000587165	GPR75-ASB3	A0A0A6YYF3	556 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	USP2	O75604	605 aa	Predicted RBP	6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	IDH1	O75874	414 aa	Known RBP	6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	CETP	P11597	493 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	MCAM	P43121	646 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	RGS3	P49796	1198 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	GTF2A2	P52657	109 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	PICALM	Q13492	652 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	VGLL4	Q14135	290 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	ERO1B	Q86YB8	467 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	TEX11	Q8IYF3	940 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	NSUN4	Q96CB9	384 aa	Known RBP	6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	OTUD5	Q96G74	571 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	CLMN	Q96JQ2	1002 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	TEPSIN	Q96N21	525 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZIC5	Q96T25	663 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	IDI2	Q9BXS1	227 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	IL1RAPL2	Q9NP60	686 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	PICK1	Q9NRD5	415 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	SNRK	Q9NRH2	765 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	DBNL	Q9UJU6	430 aa	Known RBP	6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	POLR2A	P24928	1970 aa	Known RBP	6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	SSC5D	A1L4H1	1573 aa		6.23	□□□□□ -1.41
LINC01140-208	ENST00000587165	CCL15-CCL14	A0A0B4J2E2	113 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	SPDYE5	A6NIY4	337 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	NPM3	O75607	178 aa	Known RBP	6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	CAPN15	O75808	1086 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	HLA-DOA	P06340	250 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	CYP7A1	P22680	504 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	ZAP70	P43403	619 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	TM4SF4	P48230	202 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	RRP1	P56182	461 aa	Known RBP	6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	NFIA	Q12857	509 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	PPIL2	Q13356	520 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	SNAPC2	Q13487	334 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	ARHGEF6	Q15052	776 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	CCL15	Q16663	113 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	PI16	Q6UXB8	463 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	TBC1D9	Q6ZT07	1266 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	EAF2	Q96CJ1	260 aa	Predicted RBP	6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	OPTN	Q96CV9	577 aa		6.22	□□□□□ -1.41
LINC01140-208	ENST00000587165	LRRCC1	Q9C099	1032 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms