RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 CDAN1Q8IWY9 1227 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 TEPSINQ96N21 525 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 ANGEL1Q9UNK9 670 aaKnown RBP29.49■■■□□ 2.31
ERCC2-209ENST00000586856 OTOFQ9HC10 1997 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 PCNTO95613 3336 aa29.48■■■□□ 2.31
ERCC2-209ENST00000586856 MECOMQ03112 1051 aa29.48■■■□□ 2.31
ERCC2-209ENST00000586856 CDC42EP5Q6NZY7 148 aa29.48■■■□□ 2.31
ERCC2-209ENST00000586856 MYO5AQ9Y4I1 1855 aaKnown RBP29.48■■■□□ 2.31
ERCC2-209ENST00000586856 SLF2Q8IX21 1173 aa29.47■■■□□ 2.31
ERCC2-209ENST00000586856 CLASRPQ8N2M8 674 aaKnown RBP29.47■■■□□ 2.31
ERCC2-209ENST00000586856 AIDAQ96BJ3 306 aa29.47■■■□□ 2.31
ERCC2-209ENST00000586856 ZIC5Q96T25 663 aa29.47■■■□□ 2.31
ERCC2-209ENST00000586856 MROH7-TTC4A0A0A0MT08 1334 aa29.46■■■□□ 2.31
ERCC2-209ENST00000586856 PPP1R12BO60237 982 aaPredicted RBP29.46■■■□□ 2.31
ERCC2-209ENST00000586856 FAM83AQ86UY5 434 aa29.46■■■□□ 2.31
ERCC2-209ENST00000586856 ZNF384Q8TF68 577 aa29.46■■■□□ 2.31
ERCC2-209ENST00000586856 RAI14Q9P0K7 980 aa29.46■■■□□ 2.31
ERCC2-209ENST00000586856 RPAP1Q9BWH6 1393 aaPredicted RBP29.46■■■□□ 2.31
ERCC2-209ENST00000586856 MAP3K11Q16584 847 aa29.45■■■□□ 2.31
ERCC2-209ENST00000586856 CRBNQ96SW2 442 aa29.45■■■□□ 2.31
ERCC2-209ENST00000586856 FOXN1O15353 648 aa29.44■■■□□ 2.3
ERCC2-209ENST00000586856 ZAP70P43403 619 aa29.44■■■□□ 2.3
ERCC2-209ENST00000586856 LDLRAD1Q5T700 205 aa29.44■■■□□ 2.3
ERCC2-209ENST00000586856 NSUN4Q96CB9 384 aaKnown RBP29.44■■■□□ 2.3
ERCC2-209ENST00000586856 FAM163AQ96GL9 167 aaPredicted RBP29.44■■■□□ 2.3
ERCC2-209ENST00000586856 USP40Q9NVE5 1235 aa29.44■■■□□ 2.3
ERCC2-209ENST00000586856 LRP2BPQ9P2M1 347 aa29.44■■■□□ 2.3
ERCC2-209ENST00000586856 RFX7Q2KHR2 1363 aa29.43■■■□□ 2.3
ERCC2-209ENST00000586856 CYP2E1P05181 493 aaPredicted RBP29.43■■■□□ 2.3
ERCC2-209ENST00000586856 BTDP43251 543 aa29.43■■■□□ 2.3
ERCC2-209ENST00000586856 GSTO1P78417 241 aa29.43■■■□□ 2.3
ERCC2-209ENST00000586856 NFIAQ12857 509 aa29.43■■■□□ 2.3
ERCC2-209ENST00000586856 DOCK2Q92608 1830 aa29.43■■■□□ 2.3
ERCC2-209ENST00000586856 BCL11AQ9H165 835 aa29.42■■■□□ 2.3
ERCC2-209ENST00000586856 IFIT2P09913 472 aaKnown RBP29.41■■■□□ 2.3
ERCC2-209ENST00000586856 IREB2P48200 963 aaKnown RBP29.41■■■□□ 2.3
ERCC2-209ENST00000586856 KIF23Q02241 960 aaPredicted RBP29.41■■■□□ 2.3
ERCC2-209ENST00000586856 PIH1D3Q9NQM4 214 aaKnown RBP29.41■■■□□ 2.3
ERCC2-209ENST00000586856 PCDHB15Q9Y5E8 787 aa29.41■■■□□ 2.3
ERCC2-209ENST00000586856 AK9Q5TCS8 1911 aa29.4■■■□□ 2.3
ERCC2-209ENST00000586856 USP2O75604 605 aaPredicted RBP29.4■■■□□ 2.3
ERCC2-209ENST00000586856 BEGAINQ9BUH8 593 aa29.4■■■□□ 2.3
ERCC2-209ENST00000586856 GPR75-ASB3A0A0A6YYF3 556 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 LDHCP07864 332 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 TCP10Q12799 353 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 FAM151AQ8WW52 585 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 CLMNQ96JQ2 1002 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 LRRCC1Q9C099 1032 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 FAM198AQ9UFP1 575 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 NDUFB9Q9Y6M9 179 aa29.39■■■□□ 2.3
ERCC2-209ENST00000586856 CTCFP49711 727 aaPredicted RBP29.38■■■□□ 2.29
ERCC2-209ENST00000586856 IDI2Q9BXS1 227 aa29.38■■■□□ 2.29
ERCC2-209ENST00000586856 DCTPP1Q9H773 170 aa29.38■■■□□ 2.29
ERCC2-209ENST00000586856 RGS3P49796 1198 aa29.37■■■□□ 2.29
ERCC2-209ENST00000586856 LAMB1P07942 1786 aa29.36■■■□□ 2.29
ERCC2-209ENST00000586856 UNCXA6NJT0 531 aa29.36■■■□□ 2.29
ERCC2-209ENST00000586856 WDHD1O75717 1129 aaPredicted RBP29.36■■■□□ 2.29
ERCC2-209ENST00000586856 RHBDL3P58872 404 aa29.36■■■□□ 2.29
ERCC2-209ENST00000586856 NAA16Q6N069 864 aaPredicted RBP29.36■■■□□ 2.29
ERCC2-209ENST00000586856 ANKRD13AQ8IZ07 590 aa29.36■■■□□ 2.29
ERCC2-209ENST00000586856 HOOK2Q96ED9 719 aa29.36■■■□□ 2.29
ERCC2-209ENST00000586856 SMARCA5O60264 1052 aaPredicted RBP29.35■■■□□ 2.29
ERCC2-209ENST00000586856 HSPA8P11142 646 aaKnown RBP29.35■■■□□ 2.29
ERCC2-209ENST00000586856 MKRN3Q13064 507 aaKnown RBP29.35■■■□□ 2.29
ERCC2-209ENST00000586856 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.35■■■□□ 2.29
ERCC2-209ENST00000586856 IGSF3O75054 1194 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 ENTPD3O75355 529 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 ZFPM1Q8IX07 1006 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.34■■■□□ 2.29
ERCC2-209ENST00000586856 SLC10A4Q96EP9 437 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 ANTXR1Q9H6X2 564 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 CDK5RAP2Q96SN8 1893 aa29.34■■■□□ 2.29
ERCC2-209ENST00000586856 IDH1O75874 414 aaKnown RBP29.33■■■□□ 2.29
ERCC2-209ENST00000586856 SPRYD7Q5W111 196 aa29.33■■■□□ 2.29
ERCC2-209ENST00000586856 DCAF15Q66K64 600 aa29.33■■■□□ 2.29
ERCC2-209ENST00000586856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.33■■■□□ 2.29
ERCC2-209ENST00000586856 CSRNP1Q96S65 589 aa29.33■■■□□ 2.29
ERCC2-209ENST00000586856 DDX4Q9NQI0 724 aaKnown RBP29.33■■■□□ 2.29
ERCC2-209ENST00000586856 CA12O43570 354 aa29.32■■■□□ 2.28
ERCC2-209ENST00000586856 PICALMQ13492 652 aa29.32■■■□□ 2.28
ERCC2-209ENST00000586856 ADGRA1Q86SQ6 560 aa29.32■■■□□ 2.28
ERCC2-209ENST00000586856 WNK4Q96J92 1243 aa29.32■■■□□ 2.28
ERCC2-209ENST00000586856 NOL10Q9BSC4 688 aaKnown RBP29.32■■■□□ 2.28
ERCC2-209ENST00000586856 FOCADQ5VW36 1801 aa29.31■■■□□ 2.28
ERCC2-209ENST00000586856 MAP4K4O95819 1239 aaPredicted RBP29.31■■■□□ 2.28
ERCC2-209ENST00000586856 LBX1P52954 281 aa29.31■■■□□ 2.28
ERCC2-209ENST00000586856 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.31■■■□□ 2.28
ERCC2-209ENST00000586856 REM2Q8IYK8 340 aaPredicted RBP29.31■■■□□ 2.28
ERCC2-209ENST00000586856 TSKSQ9UJT2 592 aa29.31■■■□□ 2.28
ERCC2-209ENST00000586856 MAP3K9P80192 1104 aa29.3■■■□□ 2.28
ERCC2-209ENST00000586856 VGLL4Q14135 290 aa29.3■■■□□ 2.28
ERCC2-209ENST00000586856 MIGA2Q7L4E1 593 aa29.3■■■□□ 2.28
ERCC2-209ENST00000586856 WRNIP1Q96S55 665 aa29.3■■■□□ 2.28
ERCC2-209ENST00000586856 DNAJC2Q99543 621 aaKnown RBP29.3■■■□□ 2.28
ERCC2-209ENST00000586856 ELP3Q9H9T3 547 aa29.3■■■□□ 2.28
ERCC2-209ENST00000586856 AATFQ9NY61 560 aaKnown RBP eCLIP29.3■■■□□ 2.28
ERCC2-209ENST00000586856 ATRNL1Q5VV63 1379 aa29.29■■■□□ 2.28
ERCC2-209ENST00000586856 ZBTB48P10074 688 aaPredicted RBP29.29■■■□□ 2.28
ERCC2-209ENST00000586856 COL13A1Q5TAT6 717 aaPredicted RBP29.29■■■□□ 2.28
ERCC2-209ENST00000586856 TEX11Q8IYF3 940 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms