RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 RAD17O75943 681 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 SASH1O94885 1247 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 VIL1P09327 827 aaKnown RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 OSBPP22059 807 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 HIBADHP31937 336 aaKnown RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 TFCP2Q12800 502 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 OS9Q13438 667 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 TJAP1Q5JTD0 557 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 USP17L1Q7RTZ2 530 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 FBXO33Q7Z6M2 555 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 VPS37DQ86XT2 251 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 FAM84BQ96KN1 310 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 GPR108Q9NPR9 543 aa9.89□□□□□ -0.83
SMAD4-204ENST00000586253 ZNF646O15015 1829 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-204ENST00000586253 MYO3BQ8WXR4 1341 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 PSMD14O00487 310 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 LCE2BO14633 110 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 RAB11FIP3O75154 756 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-204ENST00000586253 GYG1P46976 350 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 MMP14P50281 582 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 SCNN1DP51172 638 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 AGBL3Q8NEM8 1001 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
SMAD4-204ENST00000586253 DPF2Q92785 391 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 NMRK2Q9NPI5 230 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
SMAD4-204ENST00000586253 FAM205AQ6ZU69 1335 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 A0A1B0GUL7 405 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 POTECB2RU33 542 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 FKBP1AP62942 108 aaKnown RBP9.87□□□□□ -0.83
SMAD4-204ENST00000586253 DACT2Q5SW24 774 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 TTLL5Q6EMB2 1281 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 RSBN1LQ6PCB5 846 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-204ENST00000586253 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 RRAGCQ9HB90 399 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 KCNQ5Q9NR82 932 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
SMAD4-204ENST00000586253 GPRC5DQ9NZD1 345 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 EXOC6BQ9Y2D4 811 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
SMAD4-204ENST00000586253 MYH13Q9UKX3 1938 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 GMPSP49915 693 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-204ENST00000586253 TNNI3KQ59H18 835 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 PNMA8AQ86V59 439 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-204ENST00000586253 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 KIF1BPQ96EK5 621 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 XAGE2Q96GT9 111 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 GMLQ99445 158 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 TAF1DQ9H5J8 278 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-204ENST00000586253 DCTPP1Q9H773 170 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-204ENST00000586253 FPGT-TNNI3KV9GXZ4 949 aa9.86□□□□□ -0.83
SMAD4-204ENST00000586253 PDS5AQ29RF7 1337 aaKnown RBP9.85□□□□□ -0.83
SMAD4-204ENST00000586253 CENPBP07199 599 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-204ENST00000586253 ADORA1P30542 326 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 EPHX2P34913 555 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 TIMM10P62072 90 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 GTF2IP78347 998 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 HDAC1Q13547 482 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-204ENST00000586253 CCDC102BQ68D86 513 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 EXOC6Q8TAG9 804 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 TBC1D22AQ8WUA7 517 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 TATDN2Q93075 761 aa9.85□□□□□ -0.83
SMAD4-204ENST00000586253 ADARB2Q9NS39 739 aaKnown RBP9.85□□□□□ -0.83
SMAD4-204ENST00000586253 CNOT7Q9UIV1 285 aaKnown RBP9.85□□□□□ -0.83
SMAD4-204ENST00000586253 ADAMTSL1Q8N6G6 1762 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 H7C1D1 291 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 FRAT2O75474 233 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 TOMM70O94826 608 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 USP17L8P0C7I0 530 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 EPS15P42566 896 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 PHKA1P46020 1223 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 ZNF280AP59817 542 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 MFSD14BQ5SR56 506 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 USP50Q70EL3 339 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 C16orf71Q8IYS4 520 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 CLASRPQ8N2M8 674 aaKnown RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 WDR66Q8TBY9 1149 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 NEUROD6Q96NK8 337 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 LRRCC1Q9C099 1032 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-204ENST00000586253 DENND2AQ9ULE3 1009 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 SUGT1Q9Y2Z0 365 aa9.84□□□□□ -0.83
SMAD4-204ENST00000586253 ARID4AP29374 1257 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-204ENST00000586253 PPP4CP60510 307 aa9.83□□□□□ -0.84
SMAD4-204ENST00000586253 CCDC158Q5M9N0 1113 aa9.83□□□□□ -0.84
SMAD4-204ENST00000586253 GORABQ5T7V8 394 aa9.83□□□□□ -0.84
SMAD4-204ENST00000586253 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
SMAD4-204ENST00000586253 OGFOD1Q8N543 542 aa9.83□□□□□ -0.84
SMAD4-204ENST00000586253 RBM46Q8TBY0 533 aaKnown RBP9.83□□□□□ -0.84
SMAD4-204ENST00000586253 EAF2Q96CJ1 260 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-204ENST00000586253 ZNF512BQ96KM6 892 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms