RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 FOXN1O15353 648 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 AOC2O75106 756 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 LAMB1P07942 1786 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 MCAMP43121 646 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-209ENST00000586122 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 ANKRD13AQ8IZ07 590 aa12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 FAM151AQ8WW52 585 aa12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 SAGE1Q9NXZ1 904 aa12.74□□□□□ -0.37
SMARCA4-209ENST00000586122 MROH7-TTC4A0A0A0MT08 1334 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 OTOFQ9HC10 1997 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 ENTPD3O75355 529 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 ZBTB48P10074 688 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 MECOMQ03112 1051 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 DCAF15Q66K64 600 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 AACSQ86V21 672 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 SIRT2Q8IXJ6 389 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
SMARCA4-209ENST00000586122 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 CACNB3P54284 484 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 SREBF2Q12772 1141 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 PRKG1Q13976 671 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 TMEM39BQ9GZU3 492 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
SMARCA4-209ENST00000586122 RFX7Q2KHR2 1363 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 PLCG2P16885 1265 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 BTDP43251 543 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 INHBEP58166 350 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 AAMPQ13685 434 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 SPRYD7Q5W111 196 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 CSADQ9Y600 493 aa12.71□□□□□ -0.37
SMARCA4-209ENST00000586122 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 BAG3O95817 575 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 LBX1P52954 281 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 NAA16Q6N069 864 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 ZIC5Q96T25 663 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 ZNF341Q9BYN7 854 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 TLR7Q9NYK1 1049 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 COL2A1P02458 1487 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-209ENST00000586122 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 ZAP70P43403 619 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 TM4SF4P48230 202 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 RGS3P49796 1198 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 NFIAQ12857 509 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 WNK4Q96J92 1243 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 LRRCC1Q9C099 1032 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
SMARCA4-209ENST00000586122 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 RHBDL3P58872 404 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 PPP4CP60510 307 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 TCP10Q12799 353 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
SMARCA4-209ENST00000586122 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 APBB1O00213 710 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 VGLL4Q14135 290 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 OTUD7BQ6GQQ9 843 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 WRNIP1Q96S55 665 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms