RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PCDH10Q9P2E7 1040 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 DAGLAQ9Y4D2 1042 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 E9PSI1 815 aa14.55□□□□□ -0.08
LIG3-207ENST00000586119 TLR2O60603 784 aa14.55□□□□□ -0.08
LIG3-207ENST00000586119 SLC5A1P13866 664 aa14.55□□□□□ -0.08
LIG3-207ENST00000586119 PRDX5P30044 214 aa14.55□□□□□ -0.08
LIG3-207ENST00000586119 SH3TC2Q8TF17 1288 aa14.55□□□□□ -0.08
LIG3-207ENST00000586119 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
LIG3-207ENST00000586119 CETPP11597 493 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 FKBP1CQ5VVH2 108 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.54□□□□□ -0.08
LIG3-207ENST00000586119 FAM151AQ8WW52 585 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 LPIN2Q92539 896 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 ZNF341Q9BYN7 854 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 FAM198AQ9UFP1 575 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
LIG3-207ENST00000586119 KIF16BQ96L93 1317 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 ADORA1P30542 326 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 PHKA1P46020 1223 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 PPIL2Q13356 520 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 SNAPC2Q13487 334 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 MOGSQ13724 837 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 WDR66Q8TBY9 1149 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 USP40Q9NVE5 1235 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
LIG3-207ENST00000586119 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
LIG3-207ENST00000586119 MAST3O60307 1309 aa14.52□□□□□ -0.08
LIG3-207ENST00000586119 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.09
LIG3-207ENST00000586119 PPATQ06203 517 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 ATP2B3Q16720 1220 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.09
LIG3-207ENST00000586119 DCAF15Q66K64 600 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 C17orf99Q6UX52 265 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 SMC4Q9NTJ3 1288 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 ZNF112Q9UJU3 913 aa14.52□□□□□ -0.09
LIG3-207ENST00000586119 LRRFIP2Q9Y608 721 aaKnown RBP14.52□□□□□ -0.09
LIG3-207ENST00000586119 PDHXO00330 501 aa14.51□□□□□ -0.09
LIG3-207ENST00000586119 TIMM10P62072 90 aa14.51□□□□□ -0.09
LIG3-207ENST00000586119 MTFR1Q15390 333 aa14.51□□□□□ -0.09
LIG3-207ENST00000586119 ALDH1L2Q3SY69 923 aa14.51□□□□□ -0.09
LIG3-207ENST00000586119 TRMT2AQ8IZ69 625 aaKnown RBP14.51□□□□□ -0.09
LIG3-207ENST00000586119 CEP126Q9P2H0 1117 aa14.51□□□□□ -0.09
LIG3-207ENST00000586119 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.51□□□□□ -0.09
LIG3-207ENST00000586119 LDHBP07195 334 aaKnown RBP14.5□□□□□ -0.09
LIG3-207ENST00000586119 UBTFL1P0CB47 393 aaPredicted RBP14.5□□□□□ -0.09
LIG3-207ENST00000586119 DIEXFQ68CQ4 756 aaKnown RBP14.5□□□□□ -0.09
LIG3-207ENST00000586119 SH3BP5LQ7L8J4 393 aa14.5□□□□□ -0.09
LIG3-207ENST00000586119 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
LIG3-207ENST00000586119 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
LIG3-207ENST00000586119 CIAO1O76071 339 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 PSMC4P43686 418 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 ARHGEF6Q15052 776 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 GPAT2Q6NUI2 795 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 ANKRD23Q86SG2 305 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 HOOK2Q96ED9 719 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 MEIS3Q99687 375 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.49□□□□□ -0.09
LIG3-207ENST00000586119 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
LIG3-207ENST00000586119 ADGRA2Q96PE1 1338 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 PHF20L1A8MW92 1017 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 CYP2C8P10632 490 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 OSBPP22059 807 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 RGS3P49796 1198 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 KIF22Q14807 665 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 CCDC102BQ68D86 513 aa14.48□□□□□ -0.09
LIG3-207ENST00000586119 ZCCHC17Q9NP64 241 aaKnown RBP14.48□□□□□ -0.09
LIG3-207ENST00000586119 MGAMO43451 1857 aa14.47□□□□□ -0.09
LIG3-207ENST00000586119 DDTLA6NHG4 134 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 WDHD1O75717 1129 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 FMNL1O95466 1100 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 NOL9Q5SY16 702 aaKnown RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 CCDC84Q86UT8 332 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 GCC1Q96CN9 775 aa14.47□□□□□ -0.09
LIG3-207ENST00000586119 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 GNL3LQ9NVN8 582 aaKnown RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 DENND2AQ9ULE3 1009 aa14.47□□□□□ -0.09
LIG3-207ENST00000586119 TNNQ9UQP3 1299 aa14.47□□□□□ -0.09
LIG3-207ENST00000586119 COLQQ9Y215 455 aaPredicted RBP14.47□□□□□ -0.09
LIG3-207ENST00000586119 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
LIG3-207ENST00000586119 SALL1Q9NSC2 1324 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 RASGRF1Q13972 1273 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 ZNF384Q8TF68 577 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 SHISA4Q96DD7 197 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 COPRSQ9NQ92 184 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 SRRDQ9UH36 339 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 FBXO3Q9UK99 471 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 GABRQQ9UN88 632 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 ZHX2Q9Y6X8 837 aa14.46□□□□□ -0.09
LIG3-207ENST00000586119 H0YGN5 161 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 CEP290O15078 2479 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 PTPRAP18433 802 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 TFCP2Q12800 502 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms