RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
SDF2-203ENST00000585749 GREM2Q9H772 168 aa11.68□□□□□ -0.54
SDF2-203ENST00000585749 CCL15-CCL14A0A0B4J2E2 113 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 GRM8O00222 908 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 MYO1BO43795 1136 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 RASA3Q14644 834 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 CCL15Q16663 113 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
SDF2-203ENST00000585749 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 PRMT6Q96LA8 375 aaPredicted RBP11.67□□□□□ -0.54
SDF2-203ENST00000585749 SRCIN1Q9C0H9 1055 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
SDF2-203ENST00000585749 ZBTB7BO15156 539 aaPredicted RBP11.66□□□□□ -0.54
SDF2-203ENST00000585749 TLR2O60603 784 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 GNRH1P01148 92 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 CSF1RP07333 972 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 GTF2A2P52657 109 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 SLC4A10Q6U841 1118 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 HTATIP2Q9BUP3 242 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
SDF2-203ENST00000585749 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 A0A1B0GUL6 1792 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 F8W031 263 aaPredicted RBP11.65□□□□□ -0.54
SDF2-203ENST00000585749 GJA8P48165 433 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 PRMT2P55345 433 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
SDF2-203ENST00000585749 VGLL4Q14135 290 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 KIF22Q14807 665 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 ARAP2Q8WZ64 1704 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 VCANP13611 3396 aa11.65□□□□□ -0.54
SDF2-203ENST00000585749 UTYO14607 1347 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 GJB1P08034 283 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 ITGA6P23229 1130 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 CTGFP29279 349 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 FOXO4P98177 505 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
SDF2-203ENST00000585749 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 ANKRD2Q9GZV1 360 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 C9orf78Q9NZ63 289 aaPredicted RBP11.64□□□□□ -0.55
SDF2-203ENST00000585749 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
SDF2-203ENST00000585749 IGHMBP2P38935 993 aaKnown RBP11.63□□□□□ -0.55
SDF2-203ENST00000585749 ZCCHC17Q9NP64 241 aaKnown RBP11.63□□□□□ -0.55
SDF2-203ENST00000585749 SRRDQ9UH36 339 aa11.63□□□□□ -0.55
SDF2-203ENST00000585749 ZBED9Q6R2W3 1325 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 SPTBN5Q9NRC6 3674 aaKnown RBP11.62□□□□□ -0.55
SDF2-203ENST00000585749 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 SNAP23O00161 211 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
SDF2-203ENST00000585749 CCL5P13501 91 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 IL1R1P14778 569 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 GRK4P32298 578 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 RARSP54136 660 aaKnown RBP11.62□□□□□ -0.55
SDF2-203ENST00000585749 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
SDF2-203ENST00000585749 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
SDF2-203ENST00000585749 TNFAIP1Q13829 316 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 ALPK3Q96L96 1907 aa11.62□□□□□ -0.55
SDF2-203ENST00000585749 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 FARP2O94887 1054 aaPredicted RBP11.61□□□□□ -0.55
SDF2-203ENST00000585749 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
SDF2-203ENST00000585749 CETPP11597 493 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 OSBPP22059 807 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 KCNJ4P48050 445 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
SDF2-203ENST00000585749 CHRNDQ07001 517 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 C17orf99Q6UX52 265 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 C15orf52Q6ZUT6 534 aaKnown RBP11.61□□□□□ -0.55
SDF2-203ENST00000585749 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 ZNF70Q9UC06 446 aaPredicted RBP11.61□□□□□ -0.55
SDF2-203ENST00000585749 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 RIPOR2Q9Y4F9 1068 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 CSADQ9Y600 493 aa11.61□□□□□ -0.55
SDF2-203ENST00000585749 PSMC4P43686 418 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 RAET1EQ8TD07 263 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 TMEM39BQ9GZU3 492 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 TDRD3Q9H7E2 651 aaKnown RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
SDF2-203ENST00000585749 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
SDF2-203ENST00000585749 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms