RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 ZNF296Q8WUU4 475 aaPredicted RBP21.17■□□□□ 0.98
ITGB4-213ENST00000584939 OPTNQ96CV9 577 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 HOOK2Q96ED9 719 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 CFHR5Q9BXR6 569 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 R3HDMLQ9H3Y0 253 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 USP40Q9NVE5 1235 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 ABCF2Q9UG63 623 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 CSADQ9Y600 493 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 PDS5AQ29RF7 1337 aaKnown RBP21.17■□□□□ 0.98
ITGB4-213ENST00000584939 VGLL4Q14135 290 aa21.16■□□□□ 0.98
ITGB4-213ENST00000584939 NOM1Q5C9Z4 860 aaKnown RBP21.16■□□□□ 0.98
ITGB4-213ENST00000584939 CTU1Q7Z7A3 348 aaKnown RBP21.16■□□□□ 0.98
ITGB4-213ENST00000584939 SSH3Q8TE77 659 aa21.16■□□□□ 0.98
ITGB4-213ENST00000584939 FAM151AQ8WW52 585 aa21.16■□□□□ 0.98
ITGB4-213ENST00000584939 IGF2BP3O00425 579 aaKnown RBP eCLIP21.15■□□□□ 0.98
ITGB4-213ENST00000584939 TCP10Q12799 353 aa21.15■□□□□ 0.98
ITGB4-213ENST00000584939 SPTY2D1Q68D10 685 aaPredicted RBP21.15■□□□□ 0.98
ITGB4-213ENST00000584939 DZIP1Q86YF9 867 aaKnown RBP21.15■□□□□ 0.98
ITGB4-213ENST00000584939 MYH13Q9UKX3 1938 aa21.14■□□□□ 0.98
ITGB4-213ENST00000584939 NFIAQ12857 509 aa21.14■□□□□ 0.97
ITGB4-213ENST00000584939 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
ITGB4-213ENST00000584939 DCAF15Q66K64 600 aa21.14■□□□□ 0.97
ITGB4-213ENST00000584939 CNKSR2Q8WXI2 1034 aa21.14■□□□□ 0.97
ITGB4-213ENST00000584939 WRNIP1Q96S55 665 aa21.14■□□□□ 0.97
ITGB4-213ENST00000584939 HMG20BQ9P0W2 317 aa21.14■□□□□ 0.97
ITGB4-213ENST00000584939 RPAP1Q9BWH6 1393 aaPredicted RBP21.13■□□□□ 0.97
ITGB4-213ENST00000584939 TESPA1A2RU30 521 aaPredicted RBP21.13■□□□□ 0.97
ITGB4-213ENST00000584939 SURF6O75683 361 aaKnown RBP21.13■□□□□ 0.97
ITGB4-213ENST00000584939 OTUD7BQ6GQQ9 843 aa21.13■□□□□ 0.97
ITGB4-213ENST00000584939 MIGA2Q7L4E1 593 aa21.13■□□□□ 0.97
ITGB4-213ENST00000584939 SLF2Q8IX21 1173 aa21.13■□□□□ 0.97
ITGB4-213ENST00000584939 PANK1Q8TE04 598 aa21.13■□□□□ 0.97
ITGB4-213ENST00000584939 GAKO14976 1311 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 FKTNO75072 461 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 SPATA5Q8NB90 893 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 ZKSCAN4Q969J2 545 aaPredicted RBP21.12■□□□□ 0.97
ITGB4-213ENST00000584939 MS4A4AQ96JQ5 239 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 PTPN18Q99952 460 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 ZNF341Q9BYN7 854 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 FAM198AQ9UFP1 575 aa21.12■□□□□ 0.97
ITGB4-213ENST00000584939 ARID4AP29374 1257 aaPredicted RBP21.11■□□□□ 0.97
ITGB4-213ENST00000584939 MECOMQ03112 1051 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 PI16Q6UXB8 463 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 OTUD5Q96G74 571 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 FAM163AQ96GL9 167 aaPredicted RBP21.11■□□□□ 0.97
ITGB4-213ENST00000584939 GPR108Q9NPR9 543 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 RCAN3Q9UKA8 241 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 SNCAIPQ9Y6H5 919 aa21.11■□□□□ 0.97
ITGB4-213ENST00000584939 SPDYE5A6NIY4 337 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 UQCRFS1P1P0C7P4 283 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 GTF2A2P52657 109 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 TNNI3KQ59H18 835 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 TBC1D9Q6ZT07 1266 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 ZFPM1Q8IX07 1006 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 NOP58Q9Y2X3 529 aaKnown RBP21.1■□□□□ 0.97
ITGB4-213ENST00000584939 FPGT-TNNI3KV9GXZ4 949 aa21.1■□□□□ 0.97
ITGB4-213ENST00000584939 OTOFQ9HC10 1997 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 MCAMP43121 646 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 RGS3P49796 1198 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 PKN2Q16513 984 aaKnown RBP21.09■□□□□ 0.97
ITGB4-213ENST00000584939 ERO1BQ86YB8 467 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 BRI3BPQ8WY22 251 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 IDI2Q9BXS1 227 aa21.09■□□□□ 0.97
ITGB4-213ENST00000584939 MROH7-TTC4A0A0A0MT08 1334 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 CCL15-CCL14A0A0B4J2E2 113 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 ENTPD3O75355 529 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 MS4A1P11836 297 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 BTDP43251 543 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 CRHR2Q13324 411 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 CCL15Q16663 113 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 DBNDD2Q9BQY9 259 aa21.08■□□□□ 0.97
ITGB4-213ENST00000584939 INPP5BP32019 993 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 GSTO1P78417 241 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 TTC39AQ5SRH9 613 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 CEP85Q6P2H3 762 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 ZNF384Q8TF68 577 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 RAI14Q9P0K7 980 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 ZNF112Q9UJU3 913 aa21.07■□□□□ 0.96
ITGB4-213ENST00000584939 GPR75-ASB3A0A0A6YYF3 556 aa21.06■□□□□ 0.96
ITGB4-213ENST00000584939 WDHD1O75717 1129 aaPredicted RBP21.06■□□□□ 0.96
ITGB4-213ENST00000584939 LDHCP07864 332 aa21.06■□□□□ 0.96
ITGB4-213ENST00000584939 NSUN4Q96CB9 384 aaKnown RBP21.06■□□□□ 0.96
ITGB4-213ENST00000584939 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
ITGB4-213ENST00000584939 SNRKQ9NRH2 765 aa21.06■□□□□ 0.96
ITGB4-213ENST00000584939 LRP2BPQ9P2M1 347 aa21.06■□□□□ 0.96
ITGB4-213ENST00000584939 IRF6O14896 467 aa21.05■□□□□ 0.96
ITGB4-213ENST00000584939 CETPP11597 493 aa21.05■□□□□ 0.96
ITGB4-213ENST00000584939 PPIL2Q13356 520 aa21.05■□□□□ 0.96
ITGB4-213ENST00000584939 ZSCAN29Q8IWY8 852 aaPredicted RBP21.05■□□□□ 0.96
ITGB4-213ENST00000584939 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
ITGB4-213ENST00000584939 HPS5Q9UPZ3 1129 aa21.05■□□□□ 0.96
ITGB4-213ENST00000584939 RGS19P49795 217 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 RHBDL3P58872 404 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 PPATQ06203 517 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 SNAPC2Q13487 334 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 PICALMQ13492 652 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 SH3BP5LQ7L8J4 393 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms