RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TCP10L2B9ZVM9 353 aa19.87■□□□□ 0.77
ERBB2-222ENST00000584908 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
ERBB2-222ENST00000584908 ZAP70P43403 619 aa19.87■□□□□ 0.77
ERBB2-222ENST00000584908 GSTO1P78417 241 aa19.87■□□□□ 0.77
ERBB2-222ENST00000584908 NBPF12Q5TAG4 269 aaPredicted RBP19.87■□□□□ 0.77
ERBB2-222ENST00000584908 GPR75-ASB3A0A0A6YYF3 556 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 UNCXA6NJT0 531 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 FAM155AB1AL88 458 aaPredicted RBP19.86■□□□□ 0.77
ERBB2-222ENST00000584908 LDHCP07864 332 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 MAP2K2P36507 400 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 CACNB3P54284 484 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 LDLRAD1Q5T700 205 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 CCDC102AQ96A19 550 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 TMEM39BQ9GZU3 492 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 LRP2BPQ9P2M1 347 aa19.86■□□□□ 0.77
ERBB2-222ENST00000584908 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
ERBB2-222ENST00000584908 MAP4K4O95819 1239 aaPredicted RBP19.85■□□□□ 0.77
ERBB2-222ENST00000584908 PAXIP1Q6ZW49 1069 aaPredicted RBP19.85■□□□□ 0.77
ERBB2-222ENST00000584908 MOB2Q70IA6 237 aa19.85■□□□□ 0.77
ERBB2-222ENST00000584908 ARMC9Q7Z3E5 817 aa19.85■□□□□ 0.77
ERBB2-222ENST00000584908 IDI2Q9BXS1 227 aa19.85■□□□□ 0.77
ERBB2-222ENST00000584908 RAI14Q9P0K7 980 aa19.85■□□□□ 0.77
ERBB2-222ENST00000584908 OTOFQ9HC10 1997 aa19.85■□□□□ 0.77
ERBB2-222ENST00000584908 LAMB1P07942 1786 aa19.84■□□□□ 0.77
ERBB2-222ENST00000584908 PPP1R12BO60237 982 aaPredicted RBP19.84■□□□□ 0.77
ERBB2-222ENST00000584908 SLC10A3P09131 477 aa19.84■□□□□ 0.77
ERBB2-222ENST00000584908 NOGQ13253 232 aa19.84■□□□□ 0.77
ERBB2-222ENST00000584908 HDAC1Q13547 482 aaPredicted RBP19.84■□□□□ 0.77
ERBB2-222ENST00000584908 TMED8Q6PL24 325 aaPredicted RBP19.84■□□□□ 0.77
ERBB2-222ENST00000584908 FAM151AQ8WW52 585 aa19.84■□□□□ 0.77
ERBB2-222ENST00000584908 PIH1D3Q9NQM4 214 aaKnown RBP19.84■□□□□ 0.77
ERBB2-222ENST00000584908 USP40Q9NVE5 1235 aa19.84■□□□□ 0.77
ERBB2-222ENST00000584908 CDK5RAP2Q96SN8 1893 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 UBE2Q2LH0YL09 131 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 BTDP43251 543 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 ZNF157P51786 506 aaPredicted RBP19.83■□□□□ 0.77
ERBB2-222ENST00000584908 RHBDL3P58872 404 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 FAM198AQ9UFP1 575 aa19.83■□□□□ 0.77
ERBB2-222ENST00000584908 FOCADQ5VW36 1801 aa19.83■□□□□ 0.76
ERBB2-222ENST00000584908 SMARCA5O60264 1052 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-222ENST00000584908 AOC2O75106 756 aa19.82■□□□□ 0.76
ERBB2-222ENST00000584908 USP2O75604 605 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-222ENST00000584908 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
ERBB2-222ENST00000584908 ATP5JP18859 108 aa19.82■□□□□ 0.76
ERBB2-222ENST00000584908 NFIAQ12857 509 aa19.82■□□□□ 0.76
ERBB2-222ENST00000584908 TTLL12Q14166 644 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-222ENST00000584908 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
ERBB2-222ENST00000584908 ANGEL1Q9UNK9 670 aaKnown RBP19.82■□□□□ 0.76
ERBB2-222ENST00000584908 AK9Q5TCS8 1911 aa19.82■□□□□ 0.76
ERBB2-222ENST00000584908 ENTPD3O75355 529 aa19.81■□□□□ 0.76
ERBB2-222ENST00000584908 WDHD1O75717 1129 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-222ENST00000584908 MAP2K1Q02750 393 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-222ENST00000584908 NAA16Q6N069 864 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-222ENST00000584908 RASAL3Q86YV0 1011 aa19.81■□□□□ 0.76
ERBB2-222ENST00000584908 HOOK2Q96ED9 719 aa19.81■□□□□ 0.76
ERBB2-222ENST00000584908 ANTXR1Q9H6X2 564 aa19.81■□□□□ 0.76
ERBB2-222ENST00000584908 NDUFB9Q9Y6M9 179 aa19.81■□□□□ 0.76
ERBB2-222ENST00000584908 IREB2P48200 963 aaKnown RBP19.8■□□□□ 0.76
ERBB2-222ENST00000584908 PPP4CP60510 307 aa19.8■□□□□ 0.76
ERBB2-222ENST00000584908 GRM1Q13255 1194 aa19.8■□□□□ 0.76
ERBB2-222ENST00000584908 PRKG1Q13976 671 aa19.8■□□□□ 0.76
ERBB2-222ENST00000584908 TTF1Q15361 905 aaPredicted RBP19.8■□□□□ 0.76
ERBB2-222ENST00000584908 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
ERBB2-222ENST00000584908 FZD1Q9UP38 647 aa19.8■□□□□ 0.76
ERBB2-222ENST00000584908 HSPA1AP0DMV8 641 aaKnown RBP19.79■□□□□ 0.76
ERBB2-222ENST00000584908 HSPA1BP0DMV9 641 aaKnown RBP19.79■□□□□ 0.76
ERBB2-222ENST00000584908 RGS3P49796 1198 aa19.79■□□□□ 0.76
ERBB2-222ENST00000584908 MYH7P12883 1935 aa19.79■□□□□ 0.76
ERBB2-222ENST00000584908 COL2A1P02458 1487 aaPredicted RBP19.79■□□□□ 0.76
ERBB2-222ENST00000584908 ADGRA1Q86SQ6 560 aa19.78■□□□□ 0.76
ERBB2-222ENST00000584908 GCC1Q96CN9 775 aa19.78■□□□□ 0.76
ERBB2-222ENST00000584908 ZIC5Q96T25 663 aa19.78■□□□□ 0.76
ERBB2-222ENST00000584908 HAUS7Q99871 368 aa19.78■□□□□ 0.76
ERBB2-222ENST00000584908 DDX4Q9NQI0 724 aaKnown RBP19.78■□□□□ 0.76
ERBB2-222ENST00000584908 IDH1O75874 414 aaKnown RBP19.77■□□□□ 0.76
ERBB2-222ENST00000584908 BAG3O95817 575 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 PLCG2P16885 1265 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 TCP10Q12799 353 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 MAP3K12Q12852 859 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 ANKRD13AQ8IZ07 590 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERBB2-222ENST00000584908 ECHDC1Q9NTX5 307 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 ATRNL1Q5VV63 1379 aa19.77■□□□□ 0.76
ERBB2-222ENST00000584908 DCAF15Q66K64 600 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 ZFPM1Q8IX07 1006 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 REM2Q8IYK8 340 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 NOL10Q9BSC4 688 aaKnown RBP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 GOLIM4O00461 696 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 KIF23Q02241 960 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 MAP3K10Q02779 954 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 DNAJC2Q99543 621 aaKnown RBP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 BOLA2Q9H3K6 86 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 PAG1Q9NWQ8 432 aa19.76■□□□□ 0.75
ERBB2-222ENST00000584908 AATFQ9NY61 560 aaKnown RBP eCLIP19.76■□□□□ 0.75
ERBB2-222ENST00000584908 CYP7A1P22680 504 aa19.75■□□□□ 0.75
ERBB2-222ENST00000584908 SPRYD7Q5W111 196 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms