RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 DBNDD2Q9BQY9 259 aa25.53■■□□□ 1.68
TOP3A-218ENST00000584669 MANSC4A6NHS7 340 aaPredicted RBP25.52■■□□□ 1.68
TOP3A-218ENST00000584669 ARID4AP29374 1257 aaPredicted RBP25.52■■□□□ 1.68
TOP3A-218ENST00000584669 RRP1P56182 461 aaKnown RBP25.52■■□□□ 1.68
TOP3A-218ENST00000584669 MLLT1Q03111 559 aaPredicted RBP25.52■■□□□ 1.68
TOP3A-218ENST00000584669 DIXDC1Q155Q3 683 aa25.52■■□□□ 1.68
TOP3A-218ENST00000584669 PI16Q6UXB8 463 aa25.52■■□□□ 1.68
TOP3A-218ENST00000584669 MRIQ9BWK5 157 aa25.52■■□□□ 1.68
TOP3A-218ENST00000584669 HMG20BQ9P0W2 317 aa25.52■■□□□ 1.68
TOP3A-218ENST00000584669 PDS5AQ29RF7 1337 aaKnown RBP25.52■■□□□ 1.68
TOP3A-218ENST00000584669 GPR25O00155 361 aa25.51■■□□□ 1.67
TOP3A-218ENST00000584669 USP2O75604 605 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-218ENST00000584669 TNNI2P48788 182 aa25.51■■□□□ 1.67
TOP3A-218ENST00000584669 HHIPL2Q6UWX4 724 aa25.51■■□□□ 1.67
TOP3A-218ENST00000584669 CDAN1Q8IWY9 1227 aa25.51■■□□□ 1.67
TOP3A-218ENST00000584669 HMMRO75330 724 aa25.5■■□□□ 1.67
TOP3A-218ENST00000584669 ZBTB48P10074 688 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-218ENST00000584669 MCAMP43121 646 aa25.5■■□□□ 1.67
TOP3A-218ENST00000584669 CACNB3P54284 484 aa25.5■■□□□ 1.67
TOP3A-218ENST00000584669 APOBEC3HQ6NTF7 200 aaKnown RBP25.5■■□□□ 1.67
TOP3A-218ENST00000584669 EAF2Q96CJ1 260 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-218ENST00000584669 TMEM39BQ9GZU3 492 aa25.5■■□□□ 1.67
TOP3A-218ENST00000584669 TLR7Q9NYK1 1049 aaKnown RBP25.5■■□□□ 1.67
TOP3A-218ENST00000584669 ABCF2Q9UG63 623 aa25.5■■□□□ 1.67
TOP3A-218ENST00000584669 OTOFQ9HC10 1997 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 ERC1Q8IUD2 1116 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 ANKRD13AQ8IZ07 590 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 ZGPATQ8N5A5 531 aaKnown RBP25.49■■□□□ 1.67
TOP3A-218ENST00000584669 SPATA5Q8NB90 893 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 CCDC8Q9H0W5 538 aaPredicted RBP25.49■■□□□ 1.67
TOP3A-218ENST00000584669 R3HDMLQ9H3Y0 253 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 TMOD2Q9NZR1 351 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 DBNLQ9UJU6 430 aaKnown RBP25.49■■□□□ 1.67
TOP3A-218ENST00000584669 DAGLAQ9Y4D2 1042 aa25.49■■□□□ 1.67
TOP3A-218ENST00000584669 APBB1O00213 710 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 ALDH1A1P00352 501 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 UQCRFS1P1P0C7P4 283 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 SOX10P56693 466 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 TTC39AQ5SRH9 613 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 IFNL1Q8IU54 200 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 ELP3Q9H9T3 547 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 MAST2Q6P0Q8 1798 aa25.48■■□□□ 1.67
TOP3A-218ENST00000584669 UNCXA6NJT0 531 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 FKTNO75072 461 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 RGS19P49795 217 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 HSP90AB4PQ58FF6 505 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 RHPN1Q8TCX5 695 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 TEPSINQ96N21 525 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 IL1RAPL2Q9NP60 686 aa25.47■■□□□ 1.67
TOP3A-218ENST00000584669 GJA5P36382 358 aa25.46■■□□□ 1.67
TOP3A-218ENST00000584669 INHBEP58166 350 aa25.46■■□□□ 1.67
TOP3A-218ENST00000584669 CCDC158Q5M9N0 1113 aa25.46■■□□□ 1.67
TOP3A-218ENST00000584669 TBC1D9Q6ZT07 1266 aa25.46■■□□□ 1.67
TOP3A-218ENST00000584669 SNRKQ9NRH2 765 aa25.46■■□□□ 1.67
TOP3A-218ENST00000584669 IGF2BP3O00425 579 aaKnown RBP eCLIP25.45■■□□□ 1.66
TOP3A-218ENST00000584669 AACSQ86V21 672 aa25.45■■□□□ 1.66
TOP3A-218ENST00000584669 DZIP1Q86YF9 867 aaKnown RBP25.45■■□□□ 1.66
TOP3A-218ENST00000584669 NOM1Q5C9Z4 860 aaKnown RBP25.44■■□□□ 1.66
TOP3A-218ENST00000584669 SPTY2D1Q68D10 685 aaPredicted RBP25.44■■□□□ 1.66
TOP3A-218ENST00000584669 ERICH6Q7L0X2 663 aa25.44■■□□□ 1.66
TOP3A-218ENST00000584669 OPTNQ96CV9 577 aa25.44■■□□□ 1.66
TOP3A-218ENST00000584669 HPS5Q9UPZ3 1129 aa25.44■■□□□ 1.66
TOP3A-218ENST00000584669 DOCK2Q92608 1830 aa25.44■■□□□ 1.66
TOP3A-218ENST00000584669 CDK5RAP2Q96SN8 1893 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 PKN2Q16513 984 aaKnown RBP25.43■■□□□ 1.66
TOP3A-218ENST00000584669 CDC42EP5Q6NZY7 148 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 ZNF384Q8TF68 577 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 KIF1BPQ96EK5 621 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 CFHR5Q9BXR6 569 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 CSADQ9Y600 493 aa25.43■■□□□ 1.66
TOP3A-218ENST00000584669 MECOMQ03112 1051 aa25.42■■□□□ 1.66
TOP3A-218ENST00000584669 OTUD7BQ6GQQ9 843 aa25.42■■□□□ 1.66
TOP3A-218ENST00000584669 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
TOP3A-218ENST00000584669 GAKO14976 1311 aa25.41■■□□□ 1.66
TOP3A-218ENST00000584669 MAP3K9P80192 1104 aa25.41■■□□□ 1.66
TOP3A-218ENST00000584669 VGLL4Q14135 290 aa25.41■■□□□ 1.66
TOP3A-218ENST00000584669 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.41■■□□□ 1.66
TOP3A-218ENST00000584669 CNKSR2Q8WXI2 1034 aa25.41■■□□□ 1.66
TOP3A-218ENST00000584669 ZNF512BQ96KM6 892 aaPredicted RBP25.41■■□□□ 1.66
TOP3A-218ENST00000584669 RAB11FIP3O75154 756 aa25.4■■□□□ 1.66
TOP3A-218ENST00000584669 CRBNQ96SW2 442 aa25.4■■□□□ 1.66
TOP3A-218ENST00000584669 USP40Q9NVE5 1235 aa25.4■■□□□ 1.66
TOP3A-218ENST00000584669 RAI14Q9P0K7 980 aa25.4■■□□□ 1.66
TOP3A-218ENST00000584669 CYP2E1P05181 493 aaPredicted RBP25.39■■□□□ 1.66
TOP3A-218ENST00000584669 ZAP70P43403 619 aa25.39■■□□□ 1.66
TOP3A-218ENST00000584669 FKBP1CQ5VVH2 108 aa25.39■■□□□ 1.66
TOP3A-218ENST00000584669 FAM83AQ86UY5 434 aa25.39■■□□□ 1.66
TOP3A-218ENST00000584669 CLASRPQ8N2M8 674 aaKnown RBP25.39■■□□□ 1.66
TOP3A-218ENST00000584669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.39■■□□□ 1.66
TOP3A-218ENST00000584669 LAMB1P07942 1786 aa25.39■■□□□ 1.65
TOP3A-218ENST00000584669 MROH7-TTC4A0A0A0MT08 1334 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 NFIAQ12857 509 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 CRHR2Q13324 411 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 FBXO46Q6PJ61 603 aaPredicted RBP25.38■■□□□ 1.65
TOP3A-218ENST00000584669 SLF2Q8IX21 1173 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 NSUN4Q96CB9 384 aaKnown RBP25.38■■□□□ 1.65
TOP3A-218ENST00000584669 OTUD5Q96G74 571 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 FAM163AQ96GL9 167 aaPredicted RBP25.38■■□□□ 1.65
TOP3A-218ENST00000584669 LRP2BPQ9P2M1 347 aa25.38■■□□□ 1.65
TOP3A-218ENST00000584669 NDUFB9Q9Y6M9 179 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms