RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 FAM163AQ96GL9 167 aaPredicted RBP20.33■□□□□ 0.85
LIMD2-212ENST00000584645 RNF186Q9NXI6 227 aa20.33■□□□□ 0.85
LIMD2-212ENST00000584645 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
LIMD2-212ENST00000584645 CACNB3P54284 484 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 SPATA5Q8NB90 893 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 HMG20BQ9P0W2 317 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 FZD1Q9UP38 647 aa20.32■□□□□ 0.84
LIMD2-212ENST00000584645 IGSF3O75054 1194 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 CDC42EP5Q6NZY7 148 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
LIMD2-212ENST00000584645 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 WNK4Q96J92 1243 aa20.31■□□□□ 0.84
LIMD2-212ENST00000584645 MANSC4A6NHS7 340 aaPredicted RBP20.3■□□□□ 0.84
LIMD2-212ENST00000584645 TRPA1O75762 1119 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 INHBEP58166 350 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 CCDC158Q5M9N0 1113 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 DCAF15Q66K64 600 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 CDAN1Q8IWY9 1227 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
LIMD2-212ENST00000584645 ZBTB40Q9NUA8 1239 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 MAST2Q6P0Q8 1798 aa20.3■□□□□ 0.84
LIMD2-212ENST00000584645 HMMRO75330 724 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 MCAMP43121 646 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 GSTO1P78417 241 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
LIMD2-212ENST00000584645 CLMNQ96JQ2 1002 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 USP40Q9NVE5 1235 aa20.29■□□□□ 0.84
LIMD2-212ENST00000584645 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 MAP4K4O95819 1239 aaPredicted RBP20.28■□□□□ 0.84
LIMD2-212ENST00000584645 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 TTC39AQ5SRH9 613 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 CFHR5Q9BXR6 569 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 IDI2Q9BXS1 227 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 RFX7Q2KHR2 1363 aa20.28■□□□□ 0.84
LIMD2-212ENST00000584645 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
LIMD2-212ENST00000584645 LDHCP07864 332 aa20.27■□□□□ 0.84
LIMD2-212ENST00000584645 MECOMQ03112 1051 aa20.27■□□□□ 0.84
LIMD2-212ENST00000584645 MKRN3Q13064 507 aaKnown RBP20.27■□□□□ 0.84
LIMD2-212ENST00000584645 NOM1Q5C9Z4 860 aaKnown RBP20.27■□□□□ 0.84
LIMD2-212ENST00000584645 CSADQ9Y600 493 aa20.27■□□□□ 0.84
LIMD2-212ENST00000584645 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
LIMD2-212ENST00000584645 ENTPD3O75355 529 aa20.26■□□□□ 0.83
LIMD2-212ENST00000584645 PI16Q6UXB8 463 aa20.26■□□□□ 0.83
LIMD2-212ENST00000584645 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-212ENST00000584645 FAM198AQ9UFP1 575 aa20.26■□□□□ 0.83
LIMD2-212ENST00000584645 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 GPR75-ASB3A0A0A6YYF3 556 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 BTDP43251 543 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 NFIAQ12857 509 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 VGLL4Q14135 290 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
LIMD2-212ENST00000584645 ZNF341Q9BYN7 854 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 DBNLQ9UJU6 430 aaKnown RBP20.25■□□□□ 0.83
LIMD2-212ENST00000584645 EXOC6BQ9Y2D4 811 aa20.25■□□□□ 0.83
LIMD2-212ENST00000584645 NPM3O75607 178 aaKnown RBP20.24■□□□□ 0.83
LIMD2-212ENST00000584645 TCP10Q12799 353 aa20.24■□□□□ 0.83
LIMD2-212ENST00000584645 EAF2Q96CJ1 260 aaPredicted RBP20.24■□□□□ 0.83
LIMD2-212ENST00000584645 OPTNQ96CV9 577 aa20.24■□□□□ 0.83
LIMD2-212ENST00000584645 ELP3Q9H9T3 547 aa20.24■□□□□ 0.83
LIMD2-212ENST00000584645 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
LIMD2-212ENST00000584645 LRP2BPQ9P2M1 347 aa20.24■□□□□ 0.83
LIMD2-212ENST00000584645 TESPA1A2RU30 521 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-212ENST00000584645 GJA5P36382 358 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 OTUD7BQ6GQQ9 843 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 IFNL1Q8IU54 200 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 ZNF384Q8TF68 577 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
LIMD2-212ENST00000584645 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-212ENST00000584645 RGS3P49796 1198 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 RHBDL3P58872 404 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-212ENST00000584645 ZNF112Q9UJU3 913 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
LIMD2-212ENST00000584645 COL2A1P02458 1487 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-212ENST00000584645 RAB11FIP3O75154 756 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-212ENST00000584645 AACSQ86V21 672 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 SIRT2Q8IXJ6 389 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
LIMD2-212ENST00000584645 ATRNL1Q5VV63 1379 aa20.21■□□□□ 0.83
LIMD2-212ENST00000584645 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
LIMD2-212ENST00000584645 GTF2A2P52657 109 aa20.2■□□□□ 0.82
LIMD2-212ENST00000584645 CLASRPQ8N2M8 674 aaKnown RBP20.2■□□□□ 0.82
LIMD2-212ENST00000584645 ABHD8Q96I13 439 aa20.2■□□□□ 0.82
LIMD2-212ENST00000584645 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
LIMD2-212ENST00000584645 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms