RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 DIS3L2Q8IYB7 885 aaKnown RBP13.05□□□□□ -0.32
TOP3A-217ENST00000584582 NLRP5P59047 1200 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 ANO1Q5XXA6 986 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-217ENST00000584582 ESR2Q92731 530 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
TOP3A-217ENST00000584582 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 COL15A1P39059 1388 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 CARMIL3Q8ND23 1372 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 PICALMQ13492 652 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 ITPK1Q13572 414 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 C11orf57Q6ZUT1 292 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 RNF41Q9H4P4 317 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 OFD1O75665 1012 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 APOA5Q6Q788 366 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 PYCARDQ9ULZ3 195 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 NFAT5O94916 1531 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
TOP3A-217ENST00000584582 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
TOP3A-217ENST00000584582 CTDNEP1O95476 244 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 EIF6P56537 245 aaKnown RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 NR5A1Q13285 461 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 DHX58Q96C10 678 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 KRT23Q9C075 422 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 IFNKQ9P0W0 207 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 SMIM22K7EJ46 135 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 ZNF202O95125 648 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 TNNT1P13805 278 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 ZNF174Q15697 407 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 NEDD4P46934 1319 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 COBLO75128 1261 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
TOP3A-217ENST00000584582 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 PCMTD1Q96MG8 357 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 HOOK1Q9UJC3 728 aaKnown RBP13.03□□□□□ -0.32
TOP3A-217ENST00000584582 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.32
TOP3A-217ENST00000584582 TPM2P07951 284 aa13.02□□□□□ -0.32
TOP3A-217ENST00000584582 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.32
TOP3A-217ENST00000584582 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.32
TOP3A-217ENST00000584582 GOLPH3LQ9H4A5 285 aa13.02□□□□□ -0.32
TOP3A-217ENST00000584582 SKILP12757 684 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 CDC27P30260 824 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 PNOCQ13519 176 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-217ENST00000584582 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
TOP3A-217ENST00000584582 USP21Q9UK80 565 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 MAPK8IP1Q9UQF2 711 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
TOP3A-217ENST00000584582 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 CTAGE5O15320 804 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 PPARAQ07869 468 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 TRMT44Q8IYL2 757 aaKnown RBP13.01□□□□□ -0.33
TOP3A-217ENST00000584582 WASF1Q92558 559 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
TOP3A-217ENST00000584582 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3A-217ENST00000584582 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 CRNKL1Q9BZJ0 848 aaKnown RBP13.01□□□□□ -0.33
TOP3A-217ENST00000584582 LTN1O94822 1766 aa13.01□□□□□ -0.33
TOP3A-217ENST00000584582 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 TNKSO95271 1327 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 NMT2O60551 498 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 PFKFB1P16118 471 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 PRDX5P30044 214 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 MCM7P33993 719 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 DPCR1Q3MIW9 517 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 GRAMD1CQ8IYS0 662 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
TOP3A-217ENST00000584582 KIF28PB7ZC32 967 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 ANTXR2P58335 489 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 ZNF654Q8IZM8 581 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms