RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 PPIL2Q13356 520 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 DCAF15Q66K64 600 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 MAST3O60307 1309 aa16.35■□□□□ 0.21
CDK5RAP3-234ENST00000584525 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-234ENST00000584525 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
CDK5RAP3-234ENST00000584525 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
CDK5RAP3-234ENST00000584525 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
CDK5RAP3-234ENST00000584525 SUGT1Q9Y2Z0 365 aa16.34■□□□□ 0.21
CDK5RAP3-234ENST00000584525 PPATQ06203 517 aa16.33■□□□□ 0.2
CDK5RAP3-234ENST00000584525 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-234ENST00000584525 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
CDK5RAP3-234ENST00000584525 GNRH1P01148 92 aa16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 BRCA2P51587 3418 aa16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-234ENST00000584525 BCAR3O75815 825 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 INPP5BP32019 993 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 PRMT2P55345 433 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 TCP10Q12799 353 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 WDR66Q8TBY9 1149 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ARHGAP45Q92619 1136 aa16.31■□□□□ 0.2
CDK5RAP3-234ENST00000584525 H0YGN5 161 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 PDHXO00330 501 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 FGFR2P21802 821 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 HOXD10P28358 340 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 PSMC4P43686 418 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
CDK5RAP3-234ENST00000584525 A0A1B0GUL6 1792 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 EYA2O00167 538 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 LPIN2Q92539 896 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
CDK5RAP3-234ENST00000584525 MS4A1P11836 297 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 CTGFP29279 349 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 MTFR1Q15390 333 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 CLUAP1Q96AJ1 413 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 ZNF112Q9UJU3 913 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 KIAA0100Q14667 2235 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-234ENST00000584525 RPAP1Q9BWH6 1393 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 OSBPP22059 807 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 NFIAQ12857 509 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 DPF3Q92784 378 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 USP40Q9NVE5 1235 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
CDK5RAP3-234ENST00000584525 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
CDK5RAP3-234ENST00000584525 LAMB1P07942 1786 aa16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GNAI3P08754 354 aa16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 TRIM27P14373 513 aa16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GRK4P32298 578 aa16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-234ENST00000584525 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 PRDX5P30044 214 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 SIL1Q9H173 461 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CXCL11O14625 94 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CYP2C8P10632 490 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 FCGRTP55899 365 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 MOGSQ13724 837 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 NOL9Q5SY16 702 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ATG9AQ7Z3C6 839 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ZFPM1Q8IX07 1006 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 SHISA4Q96DD7 197 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 PICK1Q9NRD5 415 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CEP126Q9P2H0 1117 aa16.24■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ADGRA2Q96PE1 1338 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CCL5P13501 91 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 UBXN2AP68543 259 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 PRKCZQ05513 592 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ATP2B3Q16720 1220 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms