RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 OPTNQ96CV9 577 aa16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 CSADQ9Y600 493 aa16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 GJA5P36382 358 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 INHBEP58166 350 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 VGLL4Q14135 290 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 POLA2Q14181 598 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SSH3Q8TE77 659 aa16.8■□□□□ 0.28
CDK5RAP3-233ENST00000584186 NFIAQ12857 509 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZNF296Q8WUU4 475 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 WRNIP1Q96S55 665 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 HMG20BQ9P0W2 317 aa16.79■□□□□ 0.28
CDK5RAP3-233ENST00000584186 PDS5AQ29RF7 1337 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 GPR25O00155 361 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ALDH1A1P00352 501 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
CDK5RAP3-233ENST00000584186 OTOFQ9HC10 1997 aa16.77■□□□□ 0.28
CDK5RAP3-233ENST00000584186 TNNI3KQ59H18 835 aa16.77■□□□□ 0.28
CDK5RAP3-233ENST00000584186 CTU1Q7Z7A3 348 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-233ENST00000584186 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZBTB22O15209 634 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MS4A1P11836 297 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 RGS3P49796 1198 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MECOMQ03112 1051 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 TTC39AQ5SRH9 613 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ZNF341Q9BYN7 854 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 RPAP1Q9BWH6 1393 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-233ENST00000584186 GAKO14976 1311 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 FKTNO75072 461 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MCAMP43121 646 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 BTDP43251 543 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 PTPN18Q99952 460 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 SNCAIPQ9Y6H5 919 aa16.75■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 GTF2A2P52657 109 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 PICALMQ13492 652 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CCL15Q16663 113 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MS4A4AQ96JQ5 239 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CFHR5Q9BXR6 569 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 GPR108Q9NPR9 543 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
CDK5RAP3-233ENST00000584186 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 INPP5BP32019 993 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 GSTO1P78417 241 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CRHR2Q13324 411 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ERO1BQ86YB8 467 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 FAM163AQ96GL9 167 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 NOP58Q9Y2X3 529 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-233ENST00000584186 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 TESPA1A2RU30 521 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ENTPD3O75355 529 aa16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 LDHCP07864 332 aa16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 ZNF384Q8TF68 577 aa16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 NSUN4Q96CB9 384 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 IDI2Q9BXS1 227 aa16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-233ENST00000584186 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.27
CDK5RAP3-233ENST00000584186 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-233ENST00000584186 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
CDK5RAP3-233ENST00000584186 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-233ENST00000584186 DBNLQ9UJU6 430 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-233ENST00000584186 APBB1O00213 710 aa16.7■□□□□ 0.26
CDK5RAP3-233ENST00000584186 IRF6O14896 467 aa16.7■□□□□ 0.26
CDK5RAP3-233ENST00000584186 CETPP11597 493 aa16.7■□□□□ 0.26
CDK5RAP3-233ENST00000584186 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms