RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ELP3Q9H9T3 547 aa26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 USP40Q9NVE5 1235 aa26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 NOP58Q9Y2X3 529 aaKnown RBP26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 TBC1D8O95759 1140 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 NFIAQ12857 509 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 TNNI3KQ59H18 835 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 SPTY2D1Q68D10 685 aaPredicted RBP26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 SPATA5Q8NB90 893 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 GPR108Q9NPR9 543 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 FPGT-TNNI3KV9GXZ4 949 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 AKAP11Q9UKA4 1901 aa26.43■■□□□ 1.82
PPP4R1-228ENST00000584074 CASP8AP2Q9UKL3 1982 aa26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 MANSC4A6NHS7 340 aaPredicted RBP26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 ARID4AP29374 1257 aaPredicted RBP26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 MAP3K9P80192 1104 aa26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 TCP10Q12799 353 aa26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 FAM151AQ8WW52 585 aa26.42■■□□□ 1.82
PPP4R1-228ENST00000584074 GAKO14976 1311 aa26.41■■□□□ 1.82
PPP4R1-228ENST00000584074 VGLL4Q14135 290 aa26.41■■□□□ 1.82
PPP4R1-228ENST00000584074 TBC1D9Q6ZT07 1266 aa26.41■■□□□ 1.82
PPP4R1-228ENST00000584074 MCOLN1Q9GZU1 580 aa26.41■■□□□ 1.82
PPP4R1-228ENST00000584074 FAM198AQ9UFP1 575 aa26.41■■□□□ 1.82
PPP4R1-228ENST00000584074 MCAMP43121 646 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 INHBEP58166 350 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 MECOMQ03112 1051 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 DGKZQ13574 1117 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 ERICH6Q7L0X2 663 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 CNKSR2Q8WXI2 1034 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 OPTNQ96CV9 577 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 DBNDD2Q9BQY9 259 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 COG6Q9Y2V7 657 aa26.4■■□□□ 1.82
PPP4R1-228ENST00000584074 RPAP1Q9BWH6 1393 aaPredicted RBP26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 UQCRFS1P1P0C7P4 283 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 MIGA2Q7L4E1 593 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 SLF2Q8IX21 1173 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 ZNF384Q8TF68 577 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 HOOK2Q96ED9 719 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 CSADQ9Y600 493 aa26.39■■□□□ 1.82
PPP4R1-228ENST00000584074 OTOFQ9HC10 1997 aa26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 IFNL1Q8IU54 200 aa26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 ZFPM1Q8IX07 1006 aa26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 FAM163AQ96GL9 167 aaPredicted RBP26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 WRNIP1Q96S55 665 aa26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 R3HDMLQ9H3Y0 253 aa26.38■■□□□ 1.81
PPP4R1-228ENST00000584074 IGF2BP3O00425 579 aaKnown RBP eCLIP26.37■■□□□ 1.81
PPP4R1-228ENST00000584074 TTC39AQ5SRH9 613 aa26.37■■□□□ 1.81
PPP4R1-228ENST00000584074 SNRKQ9NRH2 765 aa26.37■■□□□ 1.81
PPP4R1-228ENST00000584074 MROH7-TTC4A0A0A0MT08 1334 aa26.37■■□□□ 1.81
PPP4R1-228ENST00000584074 BTDP43251 543 aa26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 CCDC158Q5M9N0 1113 aa26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 DCAF15Q66K64 600 aa26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 ZKSCAN4Q969J2 545 aaPredicted RBP26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 DDX19BQ9UMR2 479 aa26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 EXOC6BQ9Y2D4 811 aa26.36■■□□□ 1.81
PPP4R1-228ENST00000584074 ALDH1A1P00352 501 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 RGS3P49796 1198 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 ZNF296Q8WUU4 475 aaPredicted RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 NSUN4Q96CB9 384 aaKnown RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 EAF2Q96CJ1 260 aaPredicted RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 CFHR5Q9BXR6 569 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 CCDC8Q9H0W5 538 aaPredicted RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 ZBTB40Q9NUA8 1239 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 TLR7Q9NYK1 1049 aaKnown RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 RAI14Q9P0K7 980 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 DBNLQ9UJU6 430 aaKnown RBP26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 SNCAIPQ9Y6H5 919 aa26.35■■□□□ 1.81
PPP4R1-228ENST00000584074 GPR25O00155 361 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 OTUD5Q96G74 571 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 MS4A4AQ96JQ5 239 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 PTPN18Q99952 460 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 IDI2Q9BXS1 227 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 ZNF341Q9BYN7 854 aa26.34■■□□□ 1.81
PPP4R1-228ENST00000584074 GPR75-ASB3A0A0A6YYF3 556 aa26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 TESPA1A2RU30 521 aaPredicted RBP26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 WDHD1O75717 1129 aaPredicted RBP26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 C20orf194Q5TEA3 1177 aa26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 LRP2BPQ9P2M1 347 aa26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 MYH2Q9UKX2 1941 aa26.33■■□□□ 1.81
PPP4R1-228ENST00000584074 RFX7Q2KHR2 1363 aa26.33■■□□□ 1.8
PPP4R1-228ENST00000584074 SPDYE5A6NIY4 337 aa26.32■■□□□ 1.8
PPP4R1-228ENST00000584074 ENTPD3O75355 529 aa26.32■■□□□ 1.8
PPP4R1-228ENST00000584074 GSTO1P78417 241 aa26.32■■□□□ 1.8
PPP4R1-228ENST00000584074 LDHCP07864 332 aa26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 INPP5BP32019 993 aa26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 RHBDL3P58872 404 aa26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 NOM1Q5C9Z4 860 aaKnown RBP26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 CTU1Q7Z7A3 348 aaKnown RBP26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 ERC1Q8IUD2 1116 aa26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 SIRT2Q8IXJ6 389 aa26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 ZNF512BQ96KM6 892 aaPredicted RBP26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 DDX4Q9NQI0 724 aaKnown RBP26.31■■□□□ 1.8
PPP4R1-228ENST00000584074 CCDC85CA6NKD9 419 aa26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 CYP2E1P05181 493 aaPredicted RBP26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 PICALMQ13492 652 aa26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 SH3BP5LQ7L8J4 393 aa26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 ERO1BQ86YB8 467 aa26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 RPAP2Q8IXW5 612 aaPredicted RBP26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 BRI3BPQ8WY22 251 aa26.3■■□□□ 1.8
PPP4R1-228ENST00000584074 ZNF112Q9UJU3 913 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms