RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LPIN2Q92539 896 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
SKA2-209ENST00000583976 ARMC5Q96C12 935 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 ARHGAP39Q9C0H5 1083 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 PTCH2Q9Y6C5 1203 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 IRF6O14896 467 aa19.5■□□□□ 0.71
SKA2-209ENST00000583976 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
SKA2-209ENST00000583976 UBTFL1P0CB47 393 aaPredicted RBP19.5■□□□□ 0.71
SKA2-209ENST00000583976 INPP5BP32019 993 aa19.5■□□□□ 0.71
SKA2-209ENST00000583976 HHIPL2Q6UWX4 724 aa19.5■□□□□ 0.71
SKA2-209ENST00000583976 PA2G4Q9UQ80 394 aaKnown RBP19.5■□□□□ 0.71
SKA2-209ENST00000583976 SUGT1Q9Y2Z0 365 aa19.5■□□□□ 0.71
SKA2-209ENST00000583976 BTBD19C9JJ37 291 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 ADORA1P30542 326 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 PHKA1P46020 1223 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 TCP10Q12799 353 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 ATP2B3Q16720 1220 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 ERO1BQ86YB8 467 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 LRRFIP2Q9Y608 721 aaKnown RBP19.49■□□□□ 0.71
SKA2-209ENST00000583976 AK9Q5TCS8 1911 aa19.49■□□□□ 0.71
SKA2-209ENST00000583976 EN2P19622 333 aaPredicted RBP19.48■□□□□ 0.71
SKA2-209ENST00000583976 PPIL2Q13356 520 aa19.48■□□□□ 0.71
SKA2-209ENST00000583976 FKBP1CQ5VVH2 108 aa19.48■□□□□ 0.71
SKA2-209ENST00000583976 CDC42EP5Q6NZY7 148 aa19.48■□□□□ 0.71
SKA2-209ENST00000583976 WDR66Q8TBY9 1149 aa19.48■□□□□ 0.71
SKA2-209ENST00000583976 MYH2Q9UKX2 1941 aa19.48■□□□□ 0.71
SKA2-209ENST00000583976 RFX7Q2KHR2 1363 aa19.47■□□□□ 0.71
SKA2-209ENST00000583976 MYCP01106 439 aaPredicted RBP19.47■□□□□ 0.71
SKA2-209ENST00000583976 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
SKA2-209ENST00000583976 ZNF333Q96JL9 665 aa19.47■□□□□ 0.71
SKA2-209ENST00000583976 MEIS3Q99687 375 aa19.47■□□□□ 0.71
SKA2-209ENST00000583976 ZNF341Q9BYN7 854 aa19.47■□□□□ 0.71
SKA2-209ENST00000583976 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 CIAO1O76071 339 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 CETPP11597 493 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 SNAPC2Q13487 334 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 DCAF15Q66K64 600 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
SKA2-209ENST00000583976 MRIQ9BWK5 157 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 FAM198AQ9UFP1 575 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
SKA2-209ENST00000583976 SLC9C1Q4G0N8 1177 aa19.45■□□□□ 0.7
SKA2-209ENST00000583976 ZFPM1Q8IX07 1006 aa19.45■□□□□ 0.7
SKA2-209ENST00000583976 FAM151AQ8WW52 585 aa19.45■□□□□ 0.7
SKA2-209ENST00000583976 API5Q9BZZ5 524 aaKnown RBP19.45■□□□□ 0.7
SKA2-209ENST00000583976 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
SKA2-209ENST00000583976 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
SKA2-209ENST00000583976 TLR2O60603 784 aa19.44■□□□□ 0.7
SKA2-209ENST00000583976 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
SKA2-209ENST00000583976 SLURP2P0DP57 97 aa19.44■□□□□ 0.7
SKA2-209ENST00000583976 CTGFP29279 349 aa19.44■□□□□ 0.7
SKA2-209ENST00000583976 SH3TC2Q8TF17 1288 aa19.44■□□□□ 0.7
SKA2-209ENST00000583976 CEP126Q9P2H0 1117 aa19.44■□□□□ 0.7
SKA2-209ENST00000583976 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
SKA2-209ENST00000583976 RASGRF1Q13972 1273 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 CLUAP1Q96AJ1 413 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.43■□□□□ 0.7
SKA2-209ENST00000583976 ADGRA2Q96PE1 1338 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 SALL1Q9NSC2 1324 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 PTPRFP10586 1907 aa19.43■□□□□ 0.7
SKA2-209ENST00000583976 PPATQ06203 517 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 MOGSQ13724 837 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 CCDC102BQ68D86 513 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 ZCCHC17Q9NP64 241 aaKnown RBP19.42■□□□□ 0.7
SKA2-209ENST00000583976 USP40Q9NVE5 1235 aa19.42■□□□□ 0.7
SKA2-209ENST00000583976 TRIM27P14373 513 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 IL15P40933 162 aaPredicted RBP19.41■□□□□ 0.7
SKA2-209ENST00000583976 ZNF112Q9UJU3 913 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 FBXO3Q9UK99 471 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 GAKO14976 1311 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 PHIPQ8WWQ0 1821 aa19.41■□□□□ 0.7
SKA2-209ENST00000583976 PDHXO00330 501 aa19.4■□□□□ 0.7
SKA2-209ENST00000583976 RGS3P49796 1198 aa19.4■□□□□ 0.7
SKA2-209ENST00000583976 NOL9Q5SY16 702 aaKnown RBP19.4■□□□□ 0.7
SKA2-209ENST00000583976 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
SKA2-209ENST00000583976 GNL3LQ9NVN8 582 aaKnown RBP19.4■□□□□ 0.7
SKA2-209ENST00000583976 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.4■□□□□ 0.7
SKA2-209ENST00000583976 DENND2AQ9ULE3 1009 aa19.4■□□□□ 0.7
SKA2-209ENST00000583976 SEMA3EO15041 775 aa19.39■□□□□ 0.69
SKA2-209ENST00000583976 C17orf99Q6UX52 265 aa19.39■□□□□ 0.69
SKA2-209ENST00000583976 SH3BP5LQ7L8J4 393 aa19.39■□□□□ 0.69
SKA2-209ENST00000583976 TRIM47Q96LD4 638 aa19.39■□□□□ 0.69
SKA2-209ENST00000583976 DDX4Q9NQI0 724 aaKnown RBP19.39■□□□□ 0.69
SKA2-209ENST00000583976 MGAMO43451 1857 aa19.39■□□□□ 0.69
SKA2-209ENST00000583976 A0A1B0GUL7 405 aa19.38■□□□□ 0.69
SKA2-209ENST00000583976 WDHD1O75717 1129 aaPredicted RBP19.38■□□□□ 0.69
SKA2-209ENST00000583976 TIMM10P62072 90 aa19.38■□□□□ 0.69
SKA2-209ENST00000583976 SLC4A8Q2Y0W8 1093 aa19.38■□□□□ 0.69
SKA2-209ENST00000583976 ANKRD23Q86SG2 305 aa19.38■□□□□ 0.69
SKA2-209ENST00000583976 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
SKA2-209ENST00000583976 TMEM106CQ9BVX2 250 aa19.38■□□□□ 0.69
SKA2-209ENST00000583976 MAST2Q6P0Q8 1798 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms