RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 FLIIQ13045 1269 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 APOBEC3FQ8IUX4 373 aaKnown RBP9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 MPHOSPH8Q99549 860 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 FAM117AQ9C073 453 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 ANKRD2Q9GZV1 360 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 COL1A1P02452 1464 aaPredicted RBP9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 SSC5DA1L4H1 1573 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 IRS2Q9Y4H2 1338 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 CSF1RP07333 972 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 SREBF2Q12772 1141 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 FKBP5Q13451 457 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 WWC1Q8IX03 1113 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 CERS5Q8N5B7 392 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 DNAAF4Q8WXU2 420 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 ZBED3Q96IU2 234 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 ADAM33Q9BZ11 813 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 R3HDMLQ9H3Y0 253 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 CD209Q9NNX6 404 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 PCDHAC2Q9Y5I4 1007 aa9.94□□□□□ -0.82
SMCHD1-210ENST00000583800 FANCIQ9NVI1 1328 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 ANKRD18BA2A2Z9 1011 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 TAF5LO75529 589 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 PKN2Q16513 984 aaKnown RBP9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 MYH16Q9H6N6 1097 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 JAG2Q9Y219 1238 aa9.93□□□□□ -0.82
SMCHD1-210ENST00000583800 AOX1Q06278 1338 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 FKTNO75072 461 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 MMP14P50281 582 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 NOM1Q5C9Z4 860 aaKnown RBP9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 LDLRAD1Q5T700 205 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 FBXO46Q6PJ61 603 aaPredicted RBP9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 LINS1Q8NG48 757 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 DEFB129Q9H1M3 183 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 RBBP6Q7Z6E9 1792 aaKnown RBP9.92□□□□□ -0.82
SMCHD1-210ENST00000583800 IL16Q14005 1332 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 CLRN2A0PK11 232 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 FOXO4P98177 505 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 CFAP100Q494V2 611 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 PRPF38BQ5VTL8 546 aaKnown RBP9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 CLMNQ96JQ2 1002 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
SMCHD1-210ENST00000583800 F6X3S4 739 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 IGF2BP3O00425 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 EVI5O60447 810 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 VAMP4O75379 141 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 IL1R1P14778 569 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 C15orf52Q6ZUT6 534 aaKnown RBP9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 ZNF804AQ7Z570 1209 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 MTMR14Q8NCE2 650 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 WNK4Q96J92 1243 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 ZNF594Q96JF6 807 aaPredicted RBP9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 VEZTQ9HBM0 779 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 PPP2R3BQ9Y5P8 575 aa9.9□□□□□ -0.82
SMCHD1-210ENST00000583800 KIAA0100Q14667 2235 aaKnown RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 MYO1BO43795 1136 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 PLIN1O60240 522 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 ZBTB48P10074 688 aaPredicted RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 EXOSC9Q06265 439 aaKnown RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 BEND3Q5T5X7 828 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 NBPF12Q5TAG4 269 aaPredicted RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 LMBR1LQ6UX01 489 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 Q6ZNB5 142 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 PRMT6Q96LA8 375 aaPredicted RBP9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 TRIM17Q9Y577 477 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 MYH13Q9UKX3 1938 aa9.89□□□□□ -0.83
SMCHD1-210ENST00000583800 HTTP42858 3142 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 GJA5P36382 358 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 RBM5P52756 815 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 FKBP1AP62942 108 aaKnown RBP9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 TAF7LQ5H9L4 462 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 OTOP1Q7RTM1 612 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 ZSWIM8A7E2V4 1837 aa9.88□□□□□ -0.83
SMCHD1-210ENST00000583800 A6NJR5 290 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 USP2O75604 605 aaPredicted RBP9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 IREB2P48200 963 aaKnown RBP9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 RASA3Q14644 834 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 CCDC57Q2TAC2 916 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 SUPT20HL1Q3ZLR7 823 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 LDHAL6AQ6ZMR3 332 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 CD99L2Q8TCZ2 262 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms