RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 TEAD4Q15561 434 aa7.98□□□□□ -1.13
PRKCA-205ENST00000583775 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
PRKCA-205ENST00000583775 THEMISQ8N1K5 641 aaPredicted RBP7.98□□□□□ -1.13
PRKCA-205ENST00000583775 VTI1AQ96AJ9 217 aa7.98□□□□□ -1.13
PRKCA-205ENST00000583775 TRAIPQ9BWF2 469 aa7.98□□□□□ -1.13
PRKCA-205ENST00000583775 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
PRKCA-205ENST00000583775 GPC6Q9Y625 555 aaPredicted RBP7.98□□□□□ -1.13
PRKCA-205ENST00000583775 EID1Q9Y6B2 187 aa7.98□□□□□ -1.13
PRKCA-205ENST00000583775 C9orf172C9J069 976 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 IGFBP4P22692 258 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 LTKP29376 864 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 SAFB2Q14151 953 aaKnown RBP eCLIP7.97□□□□□ -1.13
PRKCA-205ENST00000583775 NBPF11Q86T75 865 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 C2orf49Q9BVC5 232 aaPredicted RBP7.97□□□□□ -1.13
PRKCA-205ENST00000583775 NALCNQ8IZF0 1738 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 CEP170BQ9Y4F5 1589 aaPredicted RBP7.97□□□□□ -1.13
PRKCA-205ENST00000583775 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
PRKCA-205ENST00000583775 PPIP5K1Q6PFW1 1433 aa7.96□□□□□ -1.13
PRKCA-205ENST00000583775 CDK12Q9NYV4 1490 aaPredicted RBP7.96□□□□□ -1.13
PRKCA-205ENST00000583775 ABL1P00519 1130 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 ADH7P40394 386 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
PRKCA-205ENST00000583775 PDE4CQ08493 712 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 LRRC69Q6ZNQ3 347 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 BICDL1Q6ZP65 573 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.14
PRKCA-205ENST00000583775 SAP130Q9H0E3 1048 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 PNNQ9H307 717 aaKnown RBP7.96□□□□□ -1.14
PRKCA-205ENST00000583775 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
PRKCA-205ENST00000583775 CHD2O14647 1828 aaKnown RBP7.96□□□□□ -1.14
PRKCA-205ENST00000583775 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 KCNQ4P56696 695 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 MTMR3Q13615 1198 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 ALDH16A1Q8IZ83 802 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.95□□□□□ -1.14
PRKCA-205ENST00000583775 NUDT16Q96DE0 195 aaKnown RBP7.95□□□□□ -1.14
PRKCA-205ENST00000583775 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 PLEKHF1Q96S99 279 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 PHACTR1Q9C0D0 580 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 GOLGA2P5Q9HBQ8 144 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 IL16Q14005 1332 aa7.95□□□□□ -1.14
PRKCA-205ENST00000583775 LRRC7Q96NW7 1537 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 CT47B1P0C2W7 299 aaPredicted RBP7.94□□□□□ -1.14
PRKCA-205ENST00000583775 ELNP15502 786 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 SERPINB4P48594 390 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 B4GALNT3Q6L9W6 998 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 POTEAQ6S8J7 498 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 TXNRD3Q86VQ6 643 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 CCDC146Q8IYE0 955 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 KLK14Q9P0G3 267 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 SSH2Q76I76 1423 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 ANKARQ7Z5J8 1434 aa7.94□□□□□ -1.14
PRKCA-205ENST00000583775 A0A0A0MRY4 1105 aa7.93□□□□□ -1.14
PRKCA-205ENST00000583775 AAMPQ13685 434 aa7.93□□□□□ -1.14
PRKCA-205ENST00000583775 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
PRKCA-205ENST00000583775 PRR36Q9H6K5 1346 aa7.93□□□□□ -1.14
PRKCA-205ENST00000583775 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 FOXO3O43524 673 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
PRKCA-205ENST00000583775 BRD1O95696 1058 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 CEBPAP49715 358 aaPredicted RBP7.92□□□□□ -1.14
PRKCA-205ENST00000583775 ZNF211Q13398 564 aaPredicted RBP7.92□□□□□ -1.14
PRKCA-205ENST00000583775 EXOC6Q8TAG9 804 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 GTF3C2Q8WUA4 911 aaPredicted RBP7.92□□□□□ -1.14
PRKCA-205ENST00000583775 QTRT2Q9H974 415 aaKnown RBP7.92□□□□□ -1.14
PRKCA-205ENST00000583775 POLKQ9UBT6 870 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 LRFN2Q9ULH4 789 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 IVNS1ABPQ9Y6Y0 642 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 USP31Q70CQ4 1352 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
PRKCA-205ENST00000583775 U2AF1L5P0DN76 240 aaPredicted RBP7.91□□□□□ -1.14
PRKCA-205ENST00000583775 TNNT2P45379 298 aaPredicted RBP7.91□□□□□ -1.14
PRKCA-205ENST00000583775 U2AF1Q01081 240 aaKnown RBP eCLIP7.91□□□□□ -1.14
PRKCA-205ENST00000583775 COX20Q5RI15 118 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 MYH16Q9H6N6 1097 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 TTC21AQ8NDW8 1320 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 USP6P35125 1406 aa7.91□□□□□ -1.14
PRKCA-205ENST00000583775 RGPD8O14715 1765 aaPredicted RBP7.91□□□□□ -1.14
PRKCA-205ENST00000583775 RGPD1P0DJD0 1748 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 FANCIQ9NVI1 1328 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 ARID4AP29374 1257 aaPredicted RBP7.9□□□□□ -1.14
PRKCA-205ENST00000583775 TMPOP42166 694 aaKnown RBP7.9□□□□□ -1.14
PRKCA-205ENST00000583775 NRG1Q02297 640 aaPredicted RBP7.9□□□□□ -1.14
PRKCA-205ENST00000583775 DGKZQ13574 1117 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 TRAPPC3LQ5T215 181 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 AMOTL2Q9Y2J4 779 aa7.9□□□□□ -1.14
PRKCA-205ENST00000583775 DLG5Q8TDM6 1919 aa7.9□□□□□ -1.15
PRKCA-205ENST00000583775 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
PRKCA-205ENST00000583775 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms