RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 KIF16BQ96L93 1317 aa25.61■■□□□ 1.69
SRSF1-206ENST00000583741 LACTBP83111 547 aaPredicted RBP25.6■■□□□ 1.69
SRSF1-206ENST00000583741 SNAPC2Q13487 334 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 USP44Q9H0E7 712 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 SUGT1Q9Y2Z0 365 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 MYCP01106 439 aaPredicted RBP25.6■■□□□ 1.69
SRSF1-206ENST00000583741 PPIL2Q13356 520 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 HHIPL2Q6UWX4 724 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 MIGA2Q7L4E1 593 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 NBPF11Q86T75 865 aa25.6■■□□□ 1.69
SRSF1-206ENST00000583741 ZCCHC17Q9NP64 241 aaKnown RBP25.6■■□□□ 1.69
SRSF1-206ENST00000583741 PTPRCP08575 1304 aa25.59■■□□□ 1.69
SRSF1-206ENST00000583741 IFIT1P09914 478 aaKnown RBP25.59■■□□□ 1.69
SRSF1-206ENST00000583741 SH3TC2Q8TF17 1288 aa25.59■■□□□ 1.69
SRSF1-206ENST00000583741 AK9Q5TCS8 1911 aa25.58■■□□□ 1.69
SRSF1-206ENST00000583741 INPP5BP32019 993 aa25.58■■□□□ 1.69
SRSF1-206ENST00000583741 RFX5P48382 616 aaPredicted RBP25.58■■□□□ 1.69
SRSF1-206ENST00000583741 HOOK2Q96ED9 719 aa25.58■■□□□ 1.69
SRSF1-206ENST00000583741 WDHD1O75717 1129 aaPredicted RBP25.57■■□□□ 1.68
SRSF1-206ENST00000583741 SLC4A8Q2Y0W8 1093 aa25.57■■□□□ 1.68
SRSF1-206ENST00000583741 DCAF15Q66K64 600 aa25.57■■□□□ 1.68
SRSF1-206ENST00000583741 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.56■■□□□ 1.68
SRSF1-206ENST00000583741 SSH1Q8WYL5 1049 aa25.56■■□□□ 1.68
SRSF1-206ENST00000583741 ZNF341Q9BYN7 854 aa25.56■■□□□ 1.68
SRSF1-206ENST00000583741 SZT2Q5T011 3432 aa25.55■■□□□ 1.68
SRSF1-206ENST00000583741 EYA2O00167 538 aa25.55■■□□□ 1.68
SRSF1-206ENST00000583741 ECM2O94769 699 aaPredicted RBP25.55■■□□□ 1.68
SRSF1-206ENST00000583741 PPATQ06203 517 aa25.55■■□□□ 1.68
SRSF1-206ENST00000583741 KIF22Q14807 665 aa25.55■■□□□ 1.68
SRSF1-206ENST00000583741 DAGLAQ9Y4D2 1042 aa25.55■■□□□ 1.68
SRSF1-206ENST00000583741 RANBP2P49792 3224 aaKnown RBP25.55■■□□□ 1.68
SRSF1-206ENST00000583741 CTGFP29279 349 aa25.54■■□□□ 1.68
SRSF1-206ENST00000583741 DIXDC1Q155Q3 683 aa25.54■■□□□ 1.68
SRSF1-206ENST00000583741 FAM151AQ8WW52 585 aa25.54■■□□□ 1.68
SRSF1-206ENST00000583741 LPIN2Q92539 896 aa25.54■■□□□ 1.68
SRSF1-206ENST00000583741 SLC5A1P13866 664 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 NFIAQ12857 509 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 CDC42EP5Q6NZY7 148 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 C17orf99Q6UX52 265 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 ATG9AQ7Z3C6 839 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 WDR66Q8TBY9 1149 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 CPA4Q9UI42 421 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 TCP10Q12799 353 aa25.53■■□□□ 1.68
SRSF1-206ENST00000583741 TRIOBPQ9H2D6 2365 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 ADGRA2Q96PE1 1338 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 GNRH1P01148 92 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 PRDX5P30044 214 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 ZNF112Q9UJU3 913 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 KCNH4Q9UQ05 1017 aa25.52■■□□□ 1.68
SRSF1-206ENST00000583741 DOCK2Q92608 1830 aa25.51■■□□□ 1.67
SRSF1-206ENST00000583741 FXR1P51114 621 aaKnown RBP eCLIP25.51■■□□□ 1.67
SRSF1-206ENST00000583741 MOGSQ13724 837 aa25.51■■□□□ 1.67
SRSF1-206ENST00000583741 ANKRD23Q86SG2 305 aa25.51■■□□□ 1.67
SRSF1-206ENST00000583741 TRIM47Q96LD4 638 aa25.51■■□□□ 1.67
SRSF1-206ENST00000583741 PDHXO00330 501 aa25.5■■□□□ 1.67
SRSF1-206ENST00000583741 FAM198AQ9UFP1 575 aa25.5■■□□□ 1.67
SRSF1-206ENST00000583741 PSMC4P43686 418 aa25.49■■□□□ 1.67
SRSF1-206ENST00000583741 SIL1Q9H173 461 aa25.49■■□□□ 1.67
SRSF1-206ENST00000583741 COLQQ9Y215 455 aaPredicted RBP25.49■■□□□ 1.67
SRSF1-206ENST00000583741 MYH2Q9UKX2 1941 aa25.48■■□□□ 1.67
SRSF1-206ENST00000583741 PRMT2P55345 433 aa25.48■■□□□ 1.67
SRSF1-206ENST00000583741 MTFR1Q15390 333 aa25.48■■□□□ 1.67
SRSF1-206ENST00000583741 SRRDQ9UH36 339 aa25.48■■□□□ 1.67
SRSF1-206ENST00000583741 MGAMO43451 1857 aa25.48■■□□□ 1.67
SRSF1-206ENST00000583741 NOL9Q5SY16 702 aaKnown RBP25.47■■□□□ 1.67
SRSF1-206ENST00000583741 ZFPM1Q8IX07 1006 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 SHISA4Q96DD7 197 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 OSBPP22059 807 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 ATP2B3Q16720 1220 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 USP40Q9NVE5 1235 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 ATRNL1Q5VV63 1379 aa25.47■■□□□ 1.67
SRSF1-206ENST00000583741 H0YGN5 161 aa25.46■■□□□ 1.67
SRSF1-206ENST00000583741 LDHBP07195 334 aaKnown RBP25.46■■□□□ 1.67
SRSF1-206ENST00000583741 RCAN3Q9UKA8 241 aa25.46■■□□□ 1.67
SRSF1-206ENST00000583741 SALL1Q9NSC2 1324 aa25.44■■□□□ 1.66
SRSF1-206ENST00000583741 PTPRFP10586 1907 aa25.44■■□□□ 1.66
SRSF1-206ENST00000583741 CIAO1O76071 339 aa25.44■■□□□ 1.66
SRSF1-206ENST00000583741 PHKA1P46020 1223 aa25.44■■□□□ 1.66
SRSF1-206ENST00000583741 GPAT2Q6NUI2 795 aa25.44■■□□□ 1.66
SRSF1-206ENST00000583741 FMNL1O95466 1100 aaPredicted RBP25.43■■□□□ 1.66
SRSF1-206ENST00000583741 ALDH1L2Q3SY69 923 aa25.43■■□□□ 1.66
SRSF1-206ENST00000583741 CEP126Q9P2H0 1117 aa25.43■■□□□ 1.66
SRSF1-206ENST00000583741 FBXO3Q9UK99 471 aa25.43■■□□□ 1.66
SRSF1-206ENST00000583741 MYPNQ86TC9 1320 aa25.43■■□□□ 1.66
SRSF1-206ENST00000583741 RFX7Q2KHR2 1363 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 PHF20L1A8MW92 1017 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 UBTFL1P0CB47 393 aaPredicted RBP25.42■■□□□ 1.66
SRSF1-206ENST00000583741 CYP2C8P10632 490 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 GRK4P32298 578 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 RAET1EQ8TD07 263 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 PARK7Q99497 189 aaKnown RBP25.42■■□□□ 1.66
SRSF1-206ENST00000583741 SMC4Q9NTJ3 1288 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
SRSF1-206ENST00000583741 PHIPQ8WWQ0 1821 aa25.42■■□□□ 1.66
SRSF1-206ENST00000583741 CT47B1P0C2W7 299 aaPredicted RBP25.41■■□□□ 1.66
SRSF1-206ENST00000583741 BCRP11274 1271 aa25.41■■□□□ 1.66
SRSF1-206ENST00000583741 DENND2AQ9ULE3 1009 aa25.41■■□□□ 1.66
SRSF1-206ENST00000583741 PA2G4Q9UQ80 394 aaKnown RBP25.41■■□□□ 1.66
SRSF1-206ENST00000583741 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
SRSF1-206ENST00000583741 DOCK1Q14185 1865 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms