RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
CDH8-210ENST00000583483 LRRC37A3O60309 1634 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 NHSL1Q5SYE7 1610 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 APAF1O14727 1248 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 ZAP70P43403 619 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 EIF1AXP47813 144 aaKnown RBP8.72□□□□□ -1.01
CDH8-210ENST00000583483 HIF1AQ16665 826 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
CDH8-210ENST00000583483 ABCA3Q99758 1704 aa8.71□□□□□ -1.01
CDH8-210ENST00000583483 PXDNQ92626 1479 aa8.71□□□□□ -1.01
CDH8-210ENST00000583483 BMP4P12644 408 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 ATF3P18847 181 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 IL13P35225 146 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 ARSDP51689 593 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 WDR63Q8IWG1 891 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 CCDC146Q8IYE0 955 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
CDH8-210ENST00000583483 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 GPR152Q8TDT2 470 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 USP19O94966 1318 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 IL16Q14005 1332 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 KDRP35968 1356 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
CDH8-210ENST00000583483 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
CDH8-210ENST00000583483 HSPA2P54652 639 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 SLFN5Q08AF3 891 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 TRIP4Q15650 581 aaPredicted RBP8.7□□□□□ -1.02
CDH8-210ENST00000583483 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
CDH8-210ENST00000583483 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 TRMT2AQ8IZ69 625 aaKnown RBP8.7□□□□□ -1.02
CDH8-210ENST00000583483 TCP11L2Q8N4U5 519 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 ZFATQ9P243 1243 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 RCAN3Q9UKA8 241 aa8.7□□□□□ -1.02
CDH8-210ENST00000583483 LMO7Q8WWI1 1683 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 FZD6O60353 706 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 CT47B1P0C2W7 299 aaPredicted RBP8.69□□□□□ -1.02
CDH8-210ENST00000583483 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
CDH8-210ENST00000583483 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
CDH8-210ENST00000583483 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
CDH8-210ENST00000583483 SF3B2Q13435 895 aaKnown RBP8.69□□□□□ -1.02
CDH8-210ENST00000583483 KCNH5Q8NCM2 988 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 MAP3K19Q56UN5 1328 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 NPHP3Q7Z494 1330 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 NCAPD2Q15021 1401 aa8.69□□□□□ -1.02
CDH8-210ENST00000583483 H3BRB1 525 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 SASH3O75995 380 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 RRP1P56182 461 aaKnown RBP8.68□□□□□ -1.02
CDH8-210ENST00000583483 KCNA1Q09470 495 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
CDH8-210ENST00000583483 EDEM1Q92611 657 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 TUT1Q9H6E5 874 aaKnown RBP8.68□□□□□ -1.02
CDH8-210ENST00000583483 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 MTMR7Q9Y216 660 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
CDH8-210ENST00000583483 A6NHS1 94 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 PPM1GO15355 546 aaPredicted RBP8.67□□□□□ -1.02
CDH8-210ENST00000583483 FAM13AO94988 1023 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 PRKAR2BP31323 418 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 TMPOP42166 694 aaKnown RBP8.67□□□□□ -1.02
CDH8-210ENST00000583483 ZNF385CQ66K41 422 aaPredicted RBP8.67□□□□□ -1.02
CDH8-210ENST00000583483 SYT9Q86SS6 491 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 ABTB2Q8N961 1025 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
CDH8-210ENST00000583483 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
CDH8-210ENST00000583483 AHDC1Q5TGY3 1603 aaPredicted RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 CELA2BP08218 269 aaPredicted RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 DNM1Q05193 864 aaKnown RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 CCINQ13939 588 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 FCHSD1Q86WN1 690 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 BHMTQ93088 406 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
CDH8-210ENST00000583483 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 COL18A1P39060 1754 aa8.66□□□□□ -1.02
CDH8-210ENST00000583483 XYLBO75191 536 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 EGFRP00533 1210 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 PDGFAP04085 211 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 ARAFP10398 606 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 MAP2K3P46734 347 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 AMPHP49418 695 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 MDFIQ99750 246 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
CDH8-210ENST00000583483 COL22A1Q8NFW1 1626 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms