RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZBTB12Q9Y330 459 aaPredicted RBP19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 PSME4Q14997 1843 aa19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 RAD50Q92878 1312 aa19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MYH7P12883 1935 aa19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 ZNF646O15015 1829 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 DIXDC1Q155Q3 683 aa19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MAP1SQ66K74 1059 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 HHIPL2Q6UWX4 724 aa19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 ZNF589Q86UQ0 364 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 GPC2Q8N158 579 aa19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 PRDM10Q9NQV6 1147 aa19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MAST3O60307 1309 aa19.65■□□□□ 0.74
CDK5RAP3-228ENST00000583363 SCNN1DP51172 638 aa19.64■□□□□ 0.73
CDK5RAP3-228ENST00000583363 PPP4CP60510 307 aa19.64■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CCDC129Q6ZRS4 1044 aa19.64■□□□□ 0.73
CDK5RAP3-228ENST00000583363 PNMA8AQ86V59 439 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MROH7-TTC4A0A0A0MT08 1334 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GAKO14976 1311 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GPR75-ASB3A0A0A6YYF3 556 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 RPS12P25398 132 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MMP14P50281 582 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MIGA1Q8NAN2 632 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 STRBPQ96SI9 672 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 RIOK1Q9BRS2 568 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GJA3Q9Y6H8 435 aa19.63■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CCDC171Q6TFL3 1326 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GPAA1O43292 621 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 USP17L8P0C7I0 530 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CRKP46108 304 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CTCFP49711 727 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 DYNLL1P63167 89 aaKnown RBP19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 DPF2Q92785 391 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 TEKT1Q969V4 418 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 AIDAQ96BJ3 306 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 SERPINA10Q9UK55 444 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 HDAC9Q9UKV0 1011 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 DAGLAQ9Y4D2 1042 aa19.62■□□□□ 0.73
CDK5RAP3-228ENST00000583363 REC8O95072 547 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MBD4O95243 580 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 BAG3O95817 575 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GMPSP49915 693 aaPredicted RBP19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 DEFB115Q30KQ5 88 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 KIAA1211Q6ZU35 1233 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 ZDHHC15Q96MV8 337 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 USP26Q9BXU7 913 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 AATFQ9NY61 560 aaKnown RBP eCLIP19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MYH2Q9UKX2 1941 aa19.61■□□□□ 0.73
CDK5RAP3-228ENST00000583363 PTH1RQ03431 593 aa19.6■□□□□ 0.73
CDK5RAP3-228ENST00000583363 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-228ENST00000583363 OGFOD1Q8N543 542 aa19.6■□□□□ 0.73
CDK5RAP3-228ENST00000583363 ANO2Q9NQ90 1003 aa19.6■□□□□ 0.73
CDK5RAP3-228ENST00000583363 PATL2C9JE40 543 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 EPB41L2O43491 1005 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 HSPD1P10809 573 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 BTDP43251 543 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 LBX1P52954 281 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 ZNF280AP59817 542 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CFAP100Q494V2 611 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 VPS53Q5VIR6 699 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 CERS3Q8IU89 383 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 NOL10Q9BSC4 688 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-228ENST00000583363 MAST2Q6P0Q8 1798 aa19.58■□□□□ 0.73
CDK5RAP3-228ENST00000583363 GNAT2P19087 354 aa19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 FMR1Q06787 632 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 MTMR14Q8NCE2 650 aa19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 DSCC1Q9BVC3 393 aa19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 CNOT7Q9UIV1 285 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.72
CDK5RAP3-228ENST00000583363 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 FOXP2O15409 715 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 PRKAB2O43741 272 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 PLCG2P16885 1265 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 EPS15P42566 896 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 RBM5P52756 815 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 RHBDL3P58872 404 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 PRMT6Q96LA8 375 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 ABT1Q9ULW3 272 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SLC4A4Q9Y6R1 1079 aa19.57■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SHTN1A0MZ66 631 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 HSPA8P11142 646 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 LMOD1P29536 600 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 ALX1Q15699 326 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 MICALL2Q8IY33 904 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 ZBED3Q96IU2 234 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 USP40Q9NVE5 1235 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 RPAP1Q9BWH6 1393 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-228ENST00000583363 H7C1D1 291 aa19.55■□□□□ 0.72
CDK5RAP3-228ENST00000583363 DLGAP5Q15398 846 aa19.55■□□□□ 0.72
CDK5RAP3-228ENST00000583363 CDC42EP5Q6NZY7 148 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms