RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ANGEL1Q9UNK9 670 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-208ENST00000583344 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
SMCHD1-208ENST00000583344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 LIG1P18858 919 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 NFXL1Q6ZNB6 911 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 ZNF765Q7L2R6 523 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 ABI1Q8IZP0 508 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 ALKBH8Q96BT7 664 aaKnown RBP8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 GSX1Q9H4S2 264 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 CCDC86Q9H6F5 360 aaKnown RBP8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 CCDC39Q9UFE4 941 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 TRAK1Q9UPV9 953 aa8.06□□□□□ -1.12
SMCHD1-208ENST00000583344 PAX4O43316 350 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 FCGRTP55899 365 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 LCE3BQ5TA77 95 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 LRRC4CQ9HCJ2 640 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 BIN2Q9UBW5 565 aaPredicted RBP8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
SMCHD1-208ENST00000583344 TMPRSS2O15393 492 aa8.04□□□□□ -1.12
SMCHD1-208ENST00000583344 SEZ6L2Q6UXD5 910 aa8.04□□□□□ -1.12
SMCHD1-208ENST00000583344 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
SMCHD1-208ENST00000583344 C1GALT1Q9NS00 363 aa8.04□□□□□ -1.12
SMCHD1-208ENST00000583344 ZNF862O60290 1169 aa8.03□□□□□ -1.12
SMCHD1-208ENST00000583344 PRNPP04156 253 aa8.03□□□□□ -1.12
SMCHD1-208ENST00000583344 VSIG10LQ86VR7 867 aa8.03□□□□□ -1.12
SMCHD1-208ENST00000583344 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-208ENST00000583344 PDE4CQ08493 712 aa8.02□□□□□ -1.13
SMCHD1-208ENST00000583344 DUSP27Q5VZP5 1158 aa8.02□□□□□ -1.13
SMCHD1-208ENST00000583344 NLRP2Q9NX02 1062 aa8.02□□□□□ -1.13
SMCHD1-208ENST00000583344 ZC3H7BQ9UGR2 993 aaKnown RBP8.02□□□□□ -1.13
SMCHD1-208ENST00000583344 GSTP1P09211 210 aaKnown RBP8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 FMNL2Q96PY5 1086 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 BCO2Q9BYV7 579 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 GOLGA2P5Q9HBQ8 144 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 BSDC1Q9NW68 430 aaPredicted RBP8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 CRIM1Q9NZV1 1036 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 DCTN4Q9UJW0 460 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 SYNGAP1Q96PV0 1343 aa8.01□□□□□ -1.13
SMCHD1-208ENST00000583344 PNMA6FA0A0J9YX94 578 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 CYP27A1Q02318 531 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 ID3Q02535 119 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 CDK5R2Q13319 367 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 TP53INP2Q8IXH6 220 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 STK35Q8TDR2 534 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 FANCD2OSQ96PS1 177 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 PIDD1Q9HB75 910 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 GNEQ9Y223 722 aaKnown RBP8□□□□□ -1.13
SMCHD1-208ENST00000583344 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
SMCHD1-208ENST00000583344 MAPK1P28482 360 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 KIF4BQ2VIQ3 1234 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 PDZD3Q86UT5 571 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 KCNB2Q92953 911 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 RNF114Q9Y508 228 aa7.99□□□□□ -1.13
SMCHD1-208ENST00000583344 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 DSC3Q14574 896 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 COL19A1Q14993 1142 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 OGFOD3Q6PK18 319 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 NXPE4Q6UWF7 544 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 SULF2Q8IWU5 870 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 ATXN3LQ9H3M9 355 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 DISC1Q9NRI5 854 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 KRT82Q9NSB4 513 aa7.98□□□□□ -1.13
SMCHD1-208ENST00000583344 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
SMCHD1-208ENST00000583344 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
SMCHD1-208ENST00000583344 ENOX2Q16206 610 aaKnown RBP7.97□□□□□ -1.13
SMCHD1-208ENST00000583344 PAK6Q9NQU5 681 aaPredicted RBP7.97□□□□□ -1.13
SMCHD1-208ENST00000583344 TREHO43280 583 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 BRD1O95696 1058 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 FAM87AP0C7U9 286 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 TXKP42681 527 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 SMYD4Q8IYR2 804 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 TIMELESSQ9UNS1 1208 aa7.96□□□□□ -1.14
SMCHD1-208ENST00000583344 RNGTTO60942 597 aaKnown RBP7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 NEFMP07197 916 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 PLCB3Q01970 1234 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 ZNF574Q6ZN55 896 aaPredicted RBP7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 CBLL1Q75N03 491 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 FAM181AQ8N9Y4 354 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 SETDB2Q96T68 719 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 U3KQE9 123 aa7.95□□□□□ -1.14
SMCHD1-208ENST00000583344 CYP27C1Q4G0S4 372 aa7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
SMCHD1-208ENST00000583344 LEFTY1O75610 366 aa7.93□□□□□ -1.14
SMCHD1-208ENST00000583344 ARNTP27540 789 aa7.93□□□□□ -1.14
SMCHD1-208ENST00000583344 TPTE2Q6XPS3 522 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms