RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
GGA3-215ENST00000582821 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
GGA3-215ENST00000582821 FOXN1O15353 648 aa17.12■□□□□ 0.33
GGA3-215ENST00000582821 USP2O75604 605 aaPredicted RBP17.12■□□□□ 0.33
GGA3-215ENST00000582821 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
GGA3-215ENST00000582821 RASAL3Q86YV0 1011 aa17.12■□□□□ 0.33
GGA3-215ENST00000582821 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
GGA3-215ENST00000582821 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
GGA3-215ENST00000582821 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
GGA3-215ENST00000582821 TMEM39BQ9GZU3 492 aa17.12■□□□□ 0.33
GGA3-215ENST00000582821 TLR7Q9NYK1 1049 aaKnown RBP17.12■□□□□ 0.33
GGA3-215ENST00000582821 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 LDHCP07864 332 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 IREB2P48200 963 aaKnown RBP17.11■□□□□ 0.33
GGA3-215ENST00000582821 CTCFP49711 727 aaPredicted RBP17.11■□□□□ 0.33
GGA3-215ENST00000582821 CACNB3P54284 484 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
GGA3-215ENST00000582821 MECOMQ03112 1051 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 PRKG1Q13976 671 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 AACSQ86V21 672 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 BEGAINQ9BUH8 593 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
GGA3-215ENST00000582821 CA12O43570 354 aa17.1■□□□□ 0.33
GGA3-215ENST00000582821 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
GGA3-215ENST00000582821 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
GGA3-215ENST00000582821 GSTO1P78417 241 aa17.1■□□□□ 0.33
GGA3-215ENST00000582821 FAM151AQ8WW52 585 aa17.1■□□□□ 0.33
GGA3-215ENST00000582821 IDI2Q9BXS1 227 aa17.1■□□□□ 0.33
GGA3-215ENST00000582821 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
GGA3-215ENST00000582821 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
GGA3-215ENST00000582821 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 FZD1Q9UP38 647 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
GGA3-215ENST00000582821 AK9Q5TCS8 1911 aa17.09■□□□□ 0.33
GGA3-215ENST00000582821 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
GGA3-215ENST00000582821 ZAP70P43403 619 aa17.08■□□□□ 0.32
GGA3-215ENST00000582821 NFIAQ12857 509 aa17.08■□□□□ 0.32
GGA3-215ENST00000582821 CDAN1Q8IWY9 1227 aa17.08■□□□□ 0.32
GGA3-215ENST00000582821 ANKRD13AQ8IZ07 590 aa17.08■□□□□ 0.32
GGA3-215ENST00000582821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.08■□□□□ 0.32
GGA3-215ENST00000582821 FAM198AQ9UFP1 575 aa17.08■□□□□ 0.32
GGA3-215ENST00000582821 ENTPD3O75355 529 aa17.07■□□□□ 0.32
GGA3-215ENST00000582821 HSPA8P11142 646 aaKnown RBP17.07■□□□□ 0.32
GGA3-215ENST00000582821 BTDP43251 543 aa17.07■□□□□ 0.32
GGA3-215ENST00000582821 RHBDL3P58872 404 aa17.07■□□□□ 0.32
GGA3-215ENST00000582821 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
GGA3-215ENST00000582821 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
GGA3-215ENST00000582821 APBB1O00213 710 aa17.06■□□□□ 0.32
GGA3-215ENST00000582821 WDHD1O75717 1129 aaPredicted RBP17.06■□□□□ 0.32
GGA3-215ENST00000582821 IFIT2P09913 472 aaKnown RBP17.06■□□□□ 0.32
GGA3-215ENST00000582821 TM4SF4P48230 202 aa17.06■□□□□ 0.32
GGA3-215ENST00000582821 MAP3K9P80192 1104 aa17.06■□□□□ 0.32
GGA3-215ENST00000582821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.06■□□□□ 0.32
GGA3-215ENST00000582821 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
GGA3-215ENST00000582821 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
GGA3-215ENST00000582821 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
GGA3-215ENST00000582821 RGS3P49796 1198 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 PPP4CP60510 307 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 TCP10Q12799 353 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 DCAF15Q66K64 600 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 NAA16Q6N069 864 aaPredicted RBP17.05■□□□□ 0.32
GGA3-215ENST00000582821 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
GGA3-215ENST00000582821 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
GGA3-215ENST00000582821 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
GGA3-215ENST00000582821 LBX1P52954 281 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 INHBEP58166 350 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 AAMPQ13685 434 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
GGA3-215ENST00000582821 ZFPM1Q8IX07 1006 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 RNF186Q9NXI6 227 aa17.04■□□□□ 0.32
GGA3-215ENST00000582821 OTOFQ9HC10 1997 aa17.03■□□□□ 0.32
GGA3-215ENST00000582821 BAG3O95817 575 aa17.03■□□□□ 0.32
GGA3-215ENST00000582821 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
GGA3-215ENST00000582821 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
GGA3-215ENST00000582821 DDX4Q9NQI0 724 aaKnown RBP17.03■□□□□ 0.32
GGA3-215ENST00000582821 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
GGA3-215ENST00000582821 LAMB1P07942 1786 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 PLCG2P16885 1265 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 ATP5JP18859 108 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 SREBF2Q12772 1141 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
GGA3-215ENST00000582821 MIGA2Q7L4E1 593 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
GGA3-215ENST00000582821 DOCK2Q92608 1830 aa17.02■□□□□ 0.31
GGA3-215ENST00000582821 MANSC4A6NHS7 340 aaPredicted RBP17.01■□□□□ 0.31
GGA3-215ENST00000582821 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms