RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 ZNF512BQ96KM6 892 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 BEGAINQ9BUH8 593 aa12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 DBNLQ9UJU6 430 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 GAKO14976 1311 aa12.61□□□□□ -0.39
PPP4R1-220ENST00000581835 MECOMQ03112 1051 aa12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 DZIP1Q86YF9 867 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 ZNF384Q8TF68 577 aa12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 TLR7Q9NYK1 1049 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
PPP4R1-220ENST00000581835 UNCXA6NJT0 531 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 LBX1P52954 281 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 SLF2Q8IX21 1173 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 FAM151AQ8WW52 585 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 CSRNP1Q96S65 589 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 PRDM10Q9NQV6 1147 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 SNRKQ9NRH2 765 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 USP40Q9NVE5 1235 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
PPP4R1-220ENST00000581835 APBB1O00213 710 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 CA12O43570 354 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 RAB11FIP3O75154 756 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 NFIAQ12857 509 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 AACSQ86V21 672 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 SLC10A4Q96EP9 437 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
PPP4R1-220ENST00000581835 RPAP1Q9BWH6 1393 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 BTDP43251 543 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 ZAP70P43403 619 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 CLASRPQ8N2M8 674 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
PPP4R1-220ENST00000581835 LAMB1P07942 1786 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 LDHCP07864 332 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 GSTO1P78417 241 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 TCP10Q12799 353 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 ZFPM1Q8IX07 1006 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
PPP4R1-220ENST00000581835 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 TM4SF4P48230 202 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 RHBDL3P58872 404 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 SAGE1Q9NXZ1 904 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 DOCK2Q92608 1830 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
PPP4R1-220ENST00000581835 IGSF3O75054 1194 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 ENTPD3O75355 529 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 TRPA1O75762 1119 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 RGS3P49796 1198 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 VGLL4Q14135 290 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 PIH1D3Q9NQM4 214 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
PPP4R1-220ENST00000581835 MANSC4A6NHS7 340 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 GJA5P36382 358 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 PICALMQ13492 652 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 DCAF15Q66K64 600 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 CRBNQ96SW2 442 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 LRRCC1Q9C099 1032 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
PPP4R1-220ENST00000581835 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms