RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 LAMB1P07942 1786 aa15.25■□□□□ 0.03
SMARCD2-209ENST00000581832 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
SMARCD2-209ENST00000581832 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 NFIAQ12857 509 aa15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 GORABQ5T7V8 394 aa15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 CLMNQ96JQ2 1002 aa15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
SMARCD2-209ENST00000581832 TNNI2P48788 182 aa15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 MECOMQ03112 1051 aa15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 SPTY2D1Q68D10 685 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 RFX7Q2KHR2 1363 aa15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-209ENST00000581832 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 CA12O43570 354 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 CYP2E1P05181 493 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 TM4SF4P48230 202 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 CCDC158Q5M9N0 1113 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 SPRYD7Q5W111 196 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 FAM151AQ8WW52 585 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 IDI2Q9BXS1 227 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 USP40Q9NVE5 1235 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
SMARCD2-209ENST00000581832 GJA5P36382 358 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 RHBDL3P58872 404 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 HSP90AB4PQ58FF6 505 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
SMARCD2-209ENST00000581832 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 HMMRO75330 724 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 ZAP70P43403 619 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 SLC10A4Q96EP9 437 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 IL1RAPL2Q9NP60 686 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 SAGE1Q9NXZ1 904 aa15.2■□□□□ 0.02
SMARCD2-209ENST00000581832 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 ZBTB48P10074 688 aaPredicted RBP15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 BTDP43251 543 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 AACSQ86V21 672 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 SLF2Q8IX21 1173 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 DDX4Q9NQI0 724 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 ATRNL1Q5VV63 1379 aa15.19■□□□□ 0.02
SMARCD2-209ENST00000581832 CDK5RAP2Q96SN8 1893 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 ENTPD3O75355 529 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 TRPA1O75762 1119 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 MAP3K9P80192 1104 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 TCP10Q12799 353 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 MKRN3Q13064 507 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 PIH1D3Q9NQM4 214 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 RAI14Q9P0K7 980 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 ZNF112Q9UJU3 913 aa15.18■□□□□ 0.02
SMARCD2-209ENST00000581832 IGSF3O75054 1194 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 LDHCP07864 332 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 RGS3P49796 1198 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 MAP3K10Q02779 954 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 VGLL4Q14135 290 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 LRP2BPQ9P2M1 347 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 PCDHB15Q9Y5E8 787 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
SMARCD2-209ENST00000581832 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 TESPA1A2RU30 521 aaPredicted RBP15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 DDTLA6NHG4 134 aaPredicted RBP15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 APBB1O00213 710 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 GSTO1P78417 241 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 MIGA2Q7L4E1 593 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 MS4A4AQ96JQ5 239 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 ELP3Q9H9T3 547 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 SNCAIPQ9Y6H5 919 aa15.16■□□□□ 0.02
SMARCD2-209ENST00000581832 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms