RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 KSR2Q6VAB6 950 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 SLCO4C1Q6ZQN7 724 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 PI4KAP1Q8N8J0 262 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 STRN4Q9NRL3 753 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 PHF24Q9UPV7 400 aa8.01□□□□□ -1.13
NF1-221ENST00000581790 LRRFIP2Q9Y608 721 aaKnown RBP8.01□□□□□ -1.13
NF1-221ENST00000581790 ERVV-2B6SEH9 535 aa8□□□□□ -1.13
NF1-221ENST00000581790 CDC45O75419 566 aa8□□□□□ -1.13
NF1-221ENST00000581790 ANXA1P04083 346 aa8□□□□□ -1.13
NF1-221ENST00000581790 SNRPA1P09661 255 aaKnown RBP8□□□□□ -1.13
NF1-221ENST00000581790 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
NF1-221ENST00000581790 SLC39A6Q13433 755 aa8□□□□□ -1.13
NF1-221ENST00000581790 BEND3Q5T5X7 828 aa8□□□□□ -1.13
NF1-221ENST00000581790 TAS1R3Q7RTX0 852 aa8□□□□□ -1.13
NF1-221ENST00000581790 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
NF1-221ENST00000581790 TBC1D32Q96NH3 1257 aa8□□□□□ -1.13
NF1-221ENST00000581790 USP44Q9H0E7 712 aa8□□□□□ -1.13
NF1-221ENST00000581790 MAP3K2Q9Y2U5 619 aa8□□□□□ -1.13
NF1-221ENST00000581790 NUP98P52948 1817 aa8□□□□□ -1.13
NF1-221ENST00000581790 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 SCO2A0A1W2PP80 73 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 DGKGP49619 791 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 TJP1Q07157 1748 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 TTC22Q5TAA0 569 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 CASC1Q6TDU7 716 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 KRTAP9-9Q9BYP9 154 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 KRTAP9-4Q9BYQ2 154 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 LRRCC1Q9C099 1032 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
NF1-221ENST00000581790 C9orf78Q9NZ63 289 aaPredicted RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 NOP53Q9NZM5 478 aaKnown RBP7.99□□□□□ -1.13
NF1-221ENST00000581790 KCPQ6ZWJ8 1503 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 PRAMEF22A3QJZ6 481 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 APBB1O00213 710 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
NF1-221ENST00000581790 RAB11FIP3O75154 756 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 CLN3Q13286 438 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 HSP90AB4PQ58FF6 505 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
NF1-221ENST00000581790 LINS1Q8NG48 757 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 SSH3Q8TE77 659 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
NF1-221ENST00000581790 AK7Q96M32 723 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 GPAMQ9HCL2 828 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
NF1-221ENST00000581790 PNMA6EA0A0J9YXQ4 647 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 MYL6BP14649 208 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 ERVK-9P63128 1117 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 AIMP1Q12904 312 aaKnown RBP7.97□□□□□ -1.13
NF1-221ENST00000581790 UBAP2LQ14157 1087 aaKnown RBP7.97□□□□□ -1.13
NF1-221ENST00000581790 PROSER3Q2NL68 480 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 PPP1R42Q7Z4L9 355 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 BCL11AQ9H165 835 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 OSBPL3Q9H4L5 887 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 GGA1Q9UJY5 639 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 EXOC6BQ9Y2D4 811 aa7.97□□□□□ -1.13
NF1-221ENST00000581790 GRM8O00222 908 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 C2CD2LO14523 706 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 SRGAP3O43295 1099 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 NBPF7P0C2Y1 421 aaPredicted RBP7.96□□□□□ -1.14
NF1-221ENST00000581790 BMP4P12644 408 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 GSPT1P15170 499 aaKnown RBP7.96□□□□□ -1.14
NF1-221ENST00000581790 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 C16orf71Q8IYS4 520 aaPredicted RBP7.96□□□□□ -1.14
NF1-221ENST00000581790 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.14
NF1-221ENST00000581790 XAGE3Q8WTP9 111 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.14
NF1-221ENST00000581790 AOX1Q06278 1338 aa7.96□□□□□ -1.14
NF1-221ENST00000581790 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 TNS2Q63HR2 1409 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 SURF6O75683 361 aaKnown RBP7.95□□□□□ -1.14
NF1-221ENST00000581790 EPXP11678 715 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 MX1P20591 662 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
NF1-221ENST00000581790 PDE1AP54750 535 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 PDE4DQ08499 809 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 OS9Q13438 667 aaPredicted RBP7.95□□□□□ -1.14
NF1-221ENST00000581790 MTX1Q13505 466 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 COPS6Q7L5N1 327 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 CYP2U1Q7Z449 544 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 ERC1Q8IUD2 1116 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 KIF1BPQ96EK5 621 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 BTBD6Q96KE9 485 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 TMOD3Q9NYL9 352 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 ATXN7L1Q9ULK2 861 aaPredicted RBP7.95□□□□□ -1.14
NF1-221ENST00000581790 USP16Q9Y5T5 823 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 UTYO14607 1347 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 MYH7P12883 1935 aa7.95□□□□□ -1.14
NF1-221ENST00000581790 CICQ96RK0 1608 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms